KEGG   Mycobacterium lepraemurium: MLM_1008Help
Entry
MLM_1008          CDS       T05534                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mlp  Mycobacterium lepraemurium
Brite
KEGG Orthology (KO) [BR:mlp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    MLM_1008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mlp03400]
    MLM_1008
Enzymes [BR:mlp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MLM_1008
DNA repair and recombination proteins [BR:mlp03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     MLM_1008
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: ATA27825
UniProt: A0A250BP13
LinkDB All DBs
Position
982113..984647
Genome map
AA seq 844 aa AA seqDB search
MRAKCTVDQGGLTKFSIRGPRRRARHRRRQQPIYGHSEIRHTGVLVAGTCVAASHLAARV
SAADCTLASAAPARRFSSMNAPRAWPAEPTATPRVKLTNADKVLYPATGTTKADVFDYYT
RIADVMIPHIAGRPVTRKRWPNGVDQESFFEKQLASSAPDWLPRASVTHRSGTTTYPIID
SATGLAWIAQQAALEVHAPQWRFVAEWTRSRAEELKPGPATRLVFDLDSGEGVTMAQLAE
VARAVRDLIDGIGLQTFPLTSGSKGLHLYTPLTEPVSSKGATVLAKRVAQQLEKTMPKLV
TSTMTKSLRAGRIFVDWSQNNGSKTTIAPYSLRGRDHPTVAAPRTWDELDDPALRHLRYD
EVLTRVARDGDLLAELDASDNQTPVPDRLTKYRSMRDASKTPEPVPAAKPAAGQGNTFVI
QEHHARRLHYDFRLERDGVLVSWAVPKNLPDTPAVNHLAVHTEDHPLEYGGFEGVIPKGE
YGAGRVVIWDSGTYDAEKFQDDEVIVNLHGRKISGRYALIQTQGDQWLAHRMKDQNVFDF
DTIAPMLATHGSASALKASQWAFEGKWDGYRLLVEVDHGTLRVRSRRGREVTGEYRELCS
LAKALEDNHAVLDGEAVVLDKRGVPNFHEMQNRGKGVRVEFWAFDLLYLDGRSLLRARYR
DRRKLLEMLASGGALTVPELLPGDGDQALQQSAELGWEGVIAKRRDSTYQLGRRSSSWIK
DKHWNTQEVVIGGWKAGEGGRSSGIGSLLMGIPGPGGLHFAGRVGTGFTERDLANLKKML
APLRTDQPPFDAPLPRSEAKGVTFVEPVLVGEVRYSEWTPDDRLRQSSWRGLRPDKEASE
VVRE
NT seq 2535 nt NT seq  +upstreamnt  +downstreamnt
ttgcgggccaaatgtaccgtcgatcaagggggtctgaccaagttcagtattcggggcccg
cgccgccgcgcgcggcatcgccgccgtcaacagccgatttacgggcacagtgaaattcgc
cacaccggggtgttggtcgccggcacctgcgtcgccgcctcgcaccttgcggctcgcgtg
tcggccgccgattgcaccctggcgtcggcggcaccggcgcgtaggtttagcagcatgaac
gcgccgcgcgcttggcccgctgagccgacggcgacgccgcgggtgaaattgactaacgcc
gacaaggtgctctatcccgcgacgggaaccaccaaagccgacgtcttcgactactacacg
cggatcgccgacgtgatgatcccgcacatcgccgggcgtccggtcacccggaagcgctgg
cccaacggcgtcgatcaggaatcgttcttcgagaagcagctggcctcctcggcaccggac
tggctgccgcgcgccagcgtgacccaccgatccggcacgacgacctatccgatcatcgac
agcgccaccggcctggcctggatcgcccagcaggcggcgctggaggtgcacgcgccgcag
tggcggttcgtcgcggagtggacccgaagccgggccgaagaactcaaacccggcccggcg
actcgactggtgttcgacctcgactcgggcgaaggcgtgacgatggcccagctcgccgag
gtggcgcgcgccgtccgcgacctgatcgatgggatcgggctgcagacgttcccgctcacc
agcggcagcaagggactgcacctgtacacgccgctgacggagccggtgagcagcaaaggc
gccaccgtgctggccaaacgcgttgcgcagcaactggaaaagaccatgccgaagctggtc
acgtcgaccatgaccaagagcctgcgggcgggaaggatctttgtggactggagccagaac
aacggctccaagacgaccatcgcgccctattcgctgcgcgggcgcgaccaccccaccgtc
gccgcgccgcgcacctgggacgaactcgacgacccggcactgcgtcacctgcgctacgac
gaagtgctgacccgggtcgcccgcgacggtgacctgctcgctgagctggacgcctccgac
aaccagacaccggtgccggaccgcctgaccaaataccgcagcatgcgcgacgcctccaaa
acacccgagccggttcctgccgcaaaaccggctgcgggacaaggcaataccttcgtcatc
caagagcaccacgcccggcggctgcactacgacttccgactggagcgcgacggggtgctg
gtgtcctgggcggtgccgaagaacctgcccgacacccccgcggtgaatcacctagccgtg
cacaccgaggatcacccgctggaatacggcgggttcgagggcgtcatccccaaaggcgaa
tacggggcgggcagggtggtcatctgggactccggaacctatgacgccgagaagttccag
gacgacgaggtgatcgtcaacctgcacggccgcaagatctccgggcgctacgcgctgatc
cagacccagggcgaccaatggctggcgcaccggatgaaggaccagaacgtcttcgacttc
gacacgatcgccccgatgctcgccacccacggttcggcgtcggcgctcaaggcgagccag
tgggcgttcgagggcaaatgggacggctaccggctactggtcgaggtcgaccacggcacc
ctgcgggtgcggtcccggcgcggtcgcgaagtcaccggtgagtaccgcgaattatgctcg
ctggcaaaggctctcgaggataaccacgcggtgctcgacggcgaggccgtggtgctggac
aagcgcggcgtgcccaacttccacgagatgcagaaccgcggcaagggcgtgcgggtcgaa
ttctgggcgttcgacctgctctatctcgacggccgctcgctgctacgggcccgctaccgc
gaccggcgaaaactgttggaaatgctggcctccggcggtgctctgaccgttcccgagctg
ctgcccggcgatggtgaccaagcgctgcagcagtccgccgaactcggttgggagggcgtg
atcgccaagcggcgcgactccacctatcagctgggccggcgctcgtcctcctggatcaag
gacaagcattggaacacccaggaagtcgtgatcggcggctggaaggccggggaaggcgga
cgcagcagcggcatcggttccctgctgatgggtattccgggcccgggcggcctgcacttc
gccggccgcgtcggcaccgggttcaccgaacgcgacctggccaacttgaagaagatgctg
gctccgctgcgcaccgaccaaccgcccttcgatgcgccgcttccccgcagcgaggccaag
ggcgtcacgttcgtcgagccggtgctggtgggcgaggtgcgctacagcgagtggacaccg
gatgaccggctgcgccaatcgagttggcgcgggctgcggccggacaaggaagcaagcgag
gtggtacgagagtga

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