Melampsora larici-populina: MELLADRAFT_53062
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Entry
MELLADRAFT_53062 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mlr
Melampsora larici-populina
Pathway
mlr03030
DNA replication
mlr03410
Base excision repair
mlr03420
Nucleotide excision repair
mlr03430
Mismatch repair
mlr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MELLADRAFT_53062
03410 Base excision repair
MELLADRAFT_53062
03420 Nucleotide excision repair
MELLADRAFT_53062
03430 Mismatch repair
MELLADRAFT_53062
03440 Homologous recombination
MELLADRAFT_53062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlr03032
]
MELLADRAFT_53062
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_53062
Enzymes [BR:
mlr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MELLADRAFT_53062
DNA replication proteins [BR:
mlr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
MELLADRAFT_53062
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
MELLADRAFT_53062
MMR (mismatch excision repair)
DNA polymerase delta complex
MELLADRAFT_53062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_exo2
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
18928848
NCBI-ProteinID:
XP_007412471
JGI:
Mellp1_53062
UniProt:
F4RTG4
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MTVLSKLCWKDVSRINVILTKDQNTNSTSIDPPRALEDGSQWGRPALPPIDPSSQSIIFQ
QIDIDEQSQSNIPQLRIFGITEQGHSVLAHVQDFLPYLWVPAPKDWQNSDCKDLTAALNS
SLSMGTKPVHSVTVAHKLSLWGYTGDTKSPFLKISLTDFKHMGRVRRTCTTALLTFCSRE
LFEIGAFERGEVNFRDKFQPCTTFESNISYTLRFMIDKKITGMNWIEIPAGTYQLRSPGK
QASKCQIELDTSSDTIISHAPEGEWSKMAPFRVLSYDIECAGRKGIFPEAKIDPVIQIAN
LVTCHGSSTPFIRNVFTLDTCAHIVGSQVIEFKKEEDMLAKWQLFVEECDPDLVIGYNTT
NFDMPYLLDRAKALKVNTFPQLGRMKNIQTVVKDTHFSSKAYGTRDSKETHLDGRLQLDL
LQVMQRDYKLRSYTLNAVCAQFLGEQKEDVHHTMITELQNGNSESRRRLAVYCLKDAYLP
QRLMDKLMCFVNYTEMARVTGVPFNYLLSRGQQIKVVSQLYRRAGEFSYIVPAMKYEGSD
DQFDGAIVMDPIRGYYDVPIATLDFASLYPSIMMAHNLCYTTLTDAKTAKQLGLVENEDY
IITPNGDYFVKTSKRKGLLAIVLEDLLSARKRARAELKLETDPFKKAVLDGRQLALKVSA
NSVYGFTGATVGKLPCLPIPMSVTAFGREMIKTTKAEVEATYTKANGYEHDAQVIYGDTD
SVMVRFGCKDLATSMRLGAEAADLVSTKFVKPIKLEFEKVYFPYLLISKKRYAGLYWTKP
EKHDKMDAKGIETVRRDNCRLVQTVIETCLKKMLIDRDVQGAEDYTKQVIADLLQNKVDL
SQLVITKALAKSDYAAKQAHVELAKRMKKRDAGSAPALGDRVAYVIIKGPKDARAYEKSE
DPLYVLENNLPIDTKYYLENQLSKPLMRIFEPILGEKASSLLAGDHTRIVTIATPTQGGL
MGFVKRTETCLGCRTPLPKSTGKGMNTAVCKNCRPKTAELYTKQMALTQGFETAYSRLWT
QCQRCQGSLHQDVICTAKDCPIFYMRKKSQKDAADSHSVLQRFEGSW
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttatcgaaactttgttggaaagacgtatcaaggatcaatgtgatcctcact
aaggatcaaaacacaaattcaacctcaatcgaccctcctcgagctttagaggacggatca
caatggggccgaccagctttgcctccaatagacccaagctcacagtctatcatattccag
caaatcgacatcgatgaacaatcacagagtaacatacctcagttacgaatctttgggatc
accgaacaaggacactccgtattagctcatgttcaagatttcttaccctatctatgggtt
cccgctccaaaggattggcaaaattcggattgcaaggatcttacagctgcactgaactca
tctctctctatgggcaccaaacccgtccatagtgtcacagtagctcataaattgtctcta
tggggatacacgggcgacactaaatctccctttctcaagatatcactgaccgattttaaa
catatgggtcgtgtcagaagaacatgcaccacagctttactaacattttgttcccgcgaa
ctcttcgaaataggtgccttcgaacgaggggaggttaactttcgtgataaatttcaacct
tgtacgacctttgaaagtaacatctcatatactttgcgcttcatgattgataaaaagatc
acggggatgaactggattgagattcccgctggtacataccaattgcgatctccgggcaaa
caggcatccaaatgtcaaatcgaactggatacttcatcagacaccattatatcacacgca
ccagagggtgaatggtcaaagatggctccttttagagttctgagttacgatattgagtgt
gcaggtaggaagggaatctttcccgaagccaaaatcgatccagtcattcaaattgctaac
ttagtgacatgtcatggttcaagtacccctttcatcaggaatgttttcacccttgacaca
tgtgcacatattgtgggaagtcaagtgatagaattcaagaaggaagaagacatgttggca
aaatggcagctttttgtagaggagtgtgacccggatctggtcattgggtacaacacgact
aatttcgatatgccatatctgcttgaccgtgcaaaagccttgaaagtgaacacctttccc
caactaggacgaatgaaaaacattcagactgtagtcaaagatacacatttctcttctaaa
gcttatggaactcgtgactctaaagagactcacttggatggacgacttcaattagatctt
ttacaagtcatgcaaagagattataaactacggagttatacgctcaatgcagtctgtgct
caatttttaggggaacagaaagaagacgttcatcatacgatgattacagagcttcaaaat
ggcaactccgagtctcgacgtcggttggctgtctactgtctcaaggatgcgtaccttcca
caacgattgatggacaagctcatgtgctttgtcaattacaccgagatggctcgtgtaaca
ggcgtacccttcaattacctcttatccagaggacaacaaatcaaagtcgtctctcagctt
tatcgtcgtgcgggtgaattttcttacatcgtccccgcgatgaaatatgaaggatccgat
gatcaatttgatggtgcaattgtaatggaccctattcgaggttattacgatgttccgatc
gctactcttgatttcgcatcactttatccttcgatcatgatggcccataatctttgttat
actactttgactgatgcgaagacagccaaacaacttggccttgtagagaatgaagattac
ataatcactcccaatggcgattattttgtgaagacttctaaacgaaaaggattactggcg
attgttttagaagatcttttatcagctcgaaaacgtgcaagagcagaacttaaactagag
actgatccattcaagaaagctgtgctcgatggtcgtcaattagcattgaaagttagtgca
aattcggtatatggtttcacaggagctactgttggaaaattaccttgtttgcctattcca
atgagtgtgacggcttttggaagagagatgattaaaactacaaaggcggaagttgaagct
acttacaccaaagcaaatggatatgaacacgatgcacaagtaatttatggagatactgat
tctgtgatggttcgatttggttgcaaggatcttgcaacatccatgagattaggtgctgaa
gcggctgatttagtcagcacgaaatttgttaaacctatcaaactcgaatttgaaaaagtc
tactttccttatcttttaattagtaaaaaaagatatgctggattgtattggacaaaacca
gaaaaacatgataagatggacgctaaaggtattgagacagttcgtagggataattgtaga
ttagttcaaactgttattgaaacttgtttaaagaagatgttaattgatcgtgacgttcaa
ggtgcagaagattatacaaaacaagtcattgctgatttacttcagaataaagttgattta
tctcagttagtgatcaccaaagcgttagcaaaatcagattatgctgctaaacaggctcat
gtcgaattggcgaaacgtatgaagaaacgtgatgcgggtagtgcaccagcgctgggagat
cgagtcgcttatgtcatcatcaagggccccaaagatgcaagggcgtatgagaaatcagaa
gatccgctgtatgtgttagagaacaatttaccaattgataccaagtattaccttgagaat
caattatcaaaacctctaatgcgaatcttcgagccaattctaggagagaaagcttcatcc
ctactggcgggtgatcatactaggattgtgacgattgcaacaccaacgcaaggaggatta
atgggatttgtcaaacgtactgaaacttgtttaggatgtagaacacctttaccaaagagt
acaggaaaggggatgaatacggctgtctgtaaaaactgtagacctaaaacggctgaattg
tatactaaacaaatggcacttactcaaggatttgagaccgcttattctagattatggacc
caatgtcagagatgtcaaggatcattacatcaagatgtgatttgtacagcgaaagattgt
ccaatcttttatatgagaaagaaaagtcaaaaagatgctgctgatagtcattcagtttta
caaagatttgaaggatcttggtaa
DBGET
integrated database retrieval system