Melampsora larici-populina: MELLADRAFT_78286
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Entry
MELLADRAFT_78286 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mlr
Melampsora larici-populina
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_78286
03041 Spliceosome [BR:
mlr03041
]
MELLADRAFT_78286
03036 Chromosome and associated proteins [BR:
mlr03036
]
MELLADRAFT_78286
Enzymes [BR:
mlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MELLADRAFT_78286
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MELLADRAFT_78286
mRNA cycle factors
Common to processing body (P body) and stress granule
MELLADRAFT_78286
Spliceosome [BR:
mlr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MELLADRAFT_78286
Chromosome and associated proteins [BR:
mlr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MELLADRAFT_78286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
18933090
NCBI-ProteinID:
XP_007412038
JGI:
Mellp1_78286
UniProt:
F4RSH2
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MQHNDALNDIEGKIASITLNPTRPPYVPPHMRKVGGPPPPGPPMQHAPSPGGWGTPSMHA
PPPHHQQTGGWGAKPNFSGPPRNDGPYRGGFSGGGGGRRNDGYGEWRDGQHVVAAGNPRV
EKELFGDAQDPSKQHTGINFDRYADIPVEATGNGVPEPITEFTNPPMDPHLLANIELARY
KTPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPIISAAFAKGPLPTAGMQAQGGGY
GKRKAFPTALILAPTRELVSQIHEEARKFTYRSWVRPAVVYGGAEVGQQLRQIENGCDLL
SATPGRLVDLIERGRISLSNIRYLVLDEADRMLDMGFEPQIRRIVTGEDMPGVHERQTLM
FSATFPRDIQMLAKDFLKDYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDILTSMPQ
GGLTLVFVETKRMADMLEGFLVSSNFAATSIHGDRTQRERERALETFRSSRTPIMVATAV
AARGLDIPNVTHVVNYDLPSDIDDYVHRIGRTGRAGNTGVSTAFFNRGNKNIVRELIELL
REAHQEIPDWLEVVGRESSFGGGGRGRGGGRGRGRSGNADFRRPAPGGGMGNPYGGGGGG
YQQGGYGGYGGGYGGPPAGGQGAYMYAASGPPSGPPSGGGGGAGWW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaacataatgacgctttaaatgatatcgaaggcaaaatcgcctcgatcaccttgaac
cctactagaccgccatatgttcctcctcacatgaggaaagttggaggtcctccccctcct
ggaccacctatgcaacacgcaccctcccccggcggatggggaactccctcgatgcatgcg
ccgccacctcaccatcaacaaactggtggttggggtgccaaaccaaatttttccggtcct
cctcgcaatgatggtccataccgcggtggcttctccggaggcggaggtggccgtcgtaac
gatggctatggtgaatggcgagacggacagcatgttgttgctgctggtaacccgagagtt
gaaaaggagctctttggtgatgctcaagatcccagcaaacaacacaccggtatcaacttc
gatcgatatgccgatatcccagttgaagctactggtaacggagttcctgagccgatcact
gaattcaccaaccctcctatggacccacacttgctcgccaacatcgagctggcccgttac
aagacccctactcctgtacaaaaatactctgtccctatcgtcgctaatggtcgagatttg
atggcttgtgctcaaactggttcgggaaagacgggtggattcttatttccgatcatctcg
gctgctttcgccaaaggtcctcttcctaccgctggtatgcaagctcaaggtggcggctat
ggcaagcgtaaagctttccctaccgcactcatcttggctcctactcgtgaattggtcagt
cagatccacgaggaggcgcgcaagtttacctaccgttcttgggtccgtcctgctgttgtc
tatggtggtgccgaagttggccaacaattgcgtcaaatcgagaacgggtgtgatctactt
tcggccacaccaggaagattggtcgatctgatcgaacgtggacgcatcagtttgagcaac
atccgctacttggtccttgatgaagccgaccggatgttggacatggggttcgagcctcaa
attcgacgtatcgtcactggtgaagatatgccaggtgtccacgagcgtcagacgctcatg
ttcagtgctacattccctcgtgacattcagatgttagccaaagactttttgaaagactac
attttcctatccgtcggtcgtgtcggatctaccagcgaaaacatcactcaaaaggtcgaa
tatgtcgaagatgctgataaacgaagtgtccttcttgacatcttgacatccatgcctcaa
ggtggacttactctcgtctttgtggagaccaagcgtatggccgacatgttggaaggcttc
cttgtttcaagcaactttgctgccacctcaattcatggtgatcgtactcagcgtgaacgt
gaacgtgctcttgagacctttcgctcgagtcgcacacctatcatggtcgccaccgctgtc
gccgctcgtggactcgatatccctaacgtcactcatgttgtcaactatgatctgcctagc
gacattgacgattacgttcatcgaatcggtcgaacgggtcgtgcgggtaacactggtgtc
tctactgctttcttcaaccgtggcaataagaacattgtacgtgaattgattgagcttctc
cgtgaggctcatcaagaaattccagactggcttgaggtcgttggtcgagaatcttccttt
ggaggtggaggtcgaggacgcggtggaggacgaggacggggtcgctcgggaaatgccgat
ttccggcgaccagctcccggcggtggtatgggcaatccatatggtggtggtggtggtgga
tatcaacaaggaggctatggtggctatggtggtggttacggcggccctcctgctggcggg
cagggtgcttatatgtatgccgcaagtggccctcccagtggccctcctagtggaggtgga
ggtggtgccggatggtggtag
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