Methanosarcina mazei C16: MSMAC_3295
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Entry
MSMAC_3295 CDS
T04626
Name
(GenBank) ATP-dependent RNA helicase, EIF-4A family
Organism
mmac
Methanosarcina mazei C16
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
HHH_3
5_3_exonuc
HHH_8
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AKB73185
UniProt:
A0A0E3WQ93
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Position
4059654..4062212
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AA seq
852 aa
AA seq
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MKHPLIKPDTVEQRLYQLNLAGEALKGSSLVVLPTGLGKTIIALFVIASRLQRFGGKALI
LSPTKPLVEQHAAFFKKVMALPEEEVLAFTGSIPPAERERLWEQGKLIVSTPQVIENDIL
TRRISLENVSHITFDEAHRAVGNYAYTFIAEKYFESAKNPHVLGITASPGSSDEKISEVC
EALHVQNVAVKTEKDRDVRPYVQEKEIEWLQVNLPAEMAEIRSYLEKIFDDRLAIIRNLG
FSAGSGKYVSKKDLLLLQKKLQGEIRVGGDPAVFSAMSVVAEMMKVNHAVEMVETQGIEA
LRKYLEKLDAEASSSKASKAAKRLMDDLYMRKTLYRAKECEVEHPKLELARRIVCEQLEG
NPDSRVIVFTNYRDSAEMVVNALSRVSGVNPVRFVGQGSRHKDKGLTQKQQVEILERFRA
GEYNALVATSVAEEGLDIPATDLVLFYEPVPSEIRSIQRKGRTGRQHKGRVTVLVTKGTR
DEAYYWSSKNKEKRMLNSMHGLETVLGPKNVKKSSELSDFDSVSFISDSKPESKQNTKLD
SYPEFQGIESESMDKIESGSLENTEDFPITDFGDPGKTEGKNGKDSEIISHTKDIKLQKN
SDEIGKKEENEKDYANIKEKQKTLVDFGTASGESSDSLLKIIIDHRETKSGVAKTLDRLG
MELRFMALEIGDYIVSDRLAVERKRTDDFACSLIDGKRNLFAQLSDLARVYEKPVLIIEG
EDLFTSRQINPNAIYGSLASIAIDFGVSILYSRDEEETASILKILAKREQTENKREINPH
GKKSASTLAEQQEYLISSISNIGPKAARNLLSYFGSVEAVMRADIEELKKVKQIGPKTAA
RIREVLESPYKG
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatccattgataaagcccgacacagtggagcagaggctttaccagctcaacctt
gcaggagaagcccttaagggttcaagccttgttgtacttcctacgggacttggaaaaacc
ataatagctctttttgtaattgcctccagactccagcgtttcggaggaaaagcccttatt
ctctctcctacgaaaccccttgttgagcagcacgcagcttttttcaaaaaggtgatggct
cttcccgaagaagaggttctggcttttactggcagcattccccccgcagagagagaaagg
ctatgggaacagggaaaactgatagtatcaaccccgcaggtaattgaaaacgacatcctt
acaaggcggatcagccttgagaacgttagccatatcacttttgacgaagcccacagggca
gtcggaaactatgcctatacctttattgcggagaagtattttgagagtgcgaaaaatccg
catgtgcttggaattacagcaagcccgggaagttcggatgagaagatatcagaggtctgt
gaagccctgcatgtccagaatgtagccgtgaaaacggaaaaagatagggatgtccgccca
tatgtgcaggaaaaagaaatcgaatggcttcaggttaatcttcccgcagagatggcagaa
atccggagctatcttgagaaaattttcgacgacaggcttgcaattatcaggaacctgggc
ttttctgcaggcagcgggaaatatgtctccaaaaaagacctgctgctcctccagaaaaag
cttcagggagaaatcagggtaggaggagaccctgcagtcttttctgccatgtccgtggtc
gcagagatgatgaaggtgaaccatgcagtggaaatggtggaaacccaggggatagaagcc
ctcagaaaatatctggaaaaactcgacgctgaagcttcttcgagcaaagcgagcaaggct
gcaaaaaggttaatggacgatctctatatgcggaagaccctttaccgggcaaaagaatgc
gaggttgaacatccaaaactggagcttgcgcggagaatcgtatgcgagcaactagaaggt
aacccggactcgcgagtaattgtttttacaaactacagagacagcgctgaaatggtggtt
aacgctctttccagagtttccggagttaatcctgtccgttttgtggggcagggctctcgc
cataaggataaagggctcacgcaaaaacagcaggttgaaatccttgaaaggttcagggcc
ggggaatataatgccctggtagccacgtcggttgctgaagaaggtcttgacattcccgcc
acagaccttgttctgttttacgagcctgtcccttctgagataaggagcatccagcgcaaa
ggcaggacaggcaggcagcacaaaggcagagtgaccgttctcgtgacaaaaggcacaaga
gacgaggcttattactggagcagcaaaaacaaggaaaaaagaatgctgaacagtatgcac
ggacttgaaactgtcctgggcccgaaaaatgtcaaaaaaagctctgagctttccgatttt
gacagtgtgtcttttatttcagactcaaaaccggaatcaaaacaaaacacaaaactggac
tcttacccagaatttcaaggaattgaaagcgaaagtatggataaaatcgaaagcgggagc
ctggaaaatactgaagacttccctataactgattttggggatcccggaaaaactgaggga
aaaaacggaaaagatagcgagataatttcacacacgaaggacataaaactgcaaaaaaat
tcagatgagattggaaagaaagaagaaaacgagaaagattatgcaaacataaaagaaaag
caaaaaacccttgttgatttcggaaccgcatcaggagaaagctcagacagcctccttaaa
attataatcgaccacagagaaacaaaaagcggggttgcgaaaactctggacagactcggc
atggaactcagatttatggctcttgaaatcggagactatatcgtgagcgaccgccttgca
gtggaaaggaaacgtacagatgactttgcatgttccctgattgacggaaaacgcaacctt
tttgcccagctctctgacctggcaagagtttatgaaaaacctgttctgataattgaaggg
gaagaccttttcacttcaaggcagattaacccgaatgctatttatggttcccttgcatcc
attgcaatagattttggggtatccatcctctattcccgcgacgaagaggaaaccgcatct
attttgaaaatacttgcaaagagggagcagacagaaaataaacgtgaaatcaaccctcac
gggaaaaagtctgccagcactcttgcagaacagcaggaatacctcatctcttcaatctcg
aacatcggacctaaagcagccagaaaccttctctcgtatttcggctcggtagaggctgtt
atgagggctgatatcgaggagctgaagaaagtaaagcaaataggcccaaaaacggcggcc
agaatccgggaagttcttgaaagcccatataaaggataa
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