Mycobacterium marinum E11: MMARE11_09070
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Entry
MMARE11_09070 CDS
T04774
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V (beta chain), RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mmae
Mycobacterium marinum E11
Pathway
mmae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MMARE11_09070 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmae03400
]
MMARE11_09070 (recB)
Enzymes [BR:
mmae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MMARE11_09070 (recB)
DNA repair and recombination proteins [BR:
mmae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMARE11_09070 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDM75055
LinkDB
All DBs
Position
complement(1114320..1117652)
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AA seq
1110 aa
AA seq
DB search
MRPFDLLGPLPAENSTTVLEASAGTGKTFALAALVTRYVAEGRARLDEMLLITFGRAASQ
ELRERVRCQMVDAVRVFHDSRNGSDDADPAGDNQLLAHLLDGSAAERDARQQRLRDALAG
FDAATIATTHQFCQLVLKSLGVAGDTDAGVTLVEDLDELVTEIVDDLYLVHFGRDRDDPP
LTYRDALRIARAVVANPSTQLRPLDAPPGSRAAVCVGFAHHVLEELETRKRRRGILGYDD
LLLRLADALASEDSAARARMQQRWPVVMVDEFQDTDAVQWQVIDSAFSGRCTLILIGDPK
QAIYAFRGGDIVTYLHAAQTAGDKRTLATNWRSDSALVDRLQVVLRGAELGDPAIVVRDV
KAHHQGHRLAGAPHNDALRLRVVRRATLGRRGIQNLPIDILRDHIGRDLASDIGALLASG
ATFAGRALQANDIAVIVEKHKDARACHRALTDAGIHAVYTGDTDVFSSEAADDWLALLEA
FDQPHRPGIVRAAAATMFFGKTANDLARGGDALTDRVAETLREWADYARERGVAAIFEAA
QLGGMSDRVLSWQEGQRHMTDLAHVTQLLQEVSHRERYTLPALRDWLRGQREDRGGATER
NRRIDSDAAAVQIMTVWVSKGLQYPVVYLPFAFNRNIQERELVLFHDRGTRCLHIGGKDS
PDFGTVERLGAKEAANDDSRLTYVAMTRAQSQVVAWWSPAYDEPNGGLSRLLRGRRPGDS
VVPDRATPAKITDEDAWDRFQQWQAAGGPTVEESVIAPAPAIAGQPAPSELATRRFDRGI
DIRWRRTSYSGLIRMAEATGVSSEPEVTERDDEVAEVPLTEVVMSGTEQPSPMADLPSGA
KFGSLVHAVLETSDPFAIDLAAELESQIRVQSAWWPVQVPAAQLAAAMVPMHDTPLGPLA
GGLTLRQIGLPDRLREMDFEFPLAGGDEADAGGHAPDLRLADVGALLRAHLDASDPLAPY
ADRLSGGALGGQSLRGYLSGSVDAVLRIPDGPGQRYLVVDYKTNWLGDPDRPLTAADYQR
PRLIEAMLHSDYPLQALLYTVVLHRFLRWRQPGYDPARHLGGVLYLFVRGMCGPDTPMLD
GHPAGVFSWSPPAALVAALSDLLDAGRALA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccttcgatctgctcggcccactgcccgccgagaattccaccacggtgctcgag
gccagcgccggcacgggcaagacattcgcgttggccgcgctggtgacccgctacgtcgcg
gagggacgggcccggctcgacgagatgctgctcatcaccttcgggcgggcggccagtcag
gaacttcgtgagcgggtccgatgccaaatggtcgatgcggtgcgggttttccacgactcc
cgcaacggctccgatgacgcggaccccgccggcgacaaccaactgctggctcacctgctc
gacggcagcgccgccgagcgcgacgcgcgtcagcagcgcctgcgcgacgcgctggccgga
ttcgatgcggcaaccattgccaccacacaccagttctgccagctggtgctcaagtctttg
ggcgtcgcgggtgacaccgacgcgggtgtgacgctggtcgaagacctcgacgagctggtc
accgagattgtcgacgatctctacctggtgcacttcggccgtgaccgcgatgaccccccg
ctgacctaccgcgacgcactgcggatcgccagggcggtggtcgccaacccgtccacccag
ctgcggccgctggatgcgccgcccggatcccgggccgcggtctgtgtcggtttcgcccat
cacgttctcgaagagctggaaacccgcaagcggcgtcggggcatcctcggctacgacgac
ctgctgctgcggctggccgatgccctcgctagcgaggactctgcggcccgggcgcgaatg
cagcagcgctggccggtggtcatggtcgatgagttccaggacaccgacgcggtgcagtgg
caggtgatcgacagcgcgttcagtgggcgctgcacactgattctcatcggcgaccccaag
caggccatctacgcattccgcggtggcgacatcgtcacctacctgcacgcggcgcaaacc
gccggggacaagcggacgctggccaccaactggcgcagcgacagcgcgctggtcgatcgg
ttgcaggtggtgttgcgcggcgctgaactcggcgatcccgcaatcgtggtgcgcgatgtc
aaggcccaccaccaggggcaccggctcgcgggcgcgccgcacaacgacgccctgcggctg
cgggtggtacgccgggccacgttgggccgcaggggaatccagaacctgcccatcgacatt
ctgcgcgatcacatcggccgtgatctcgcctccgacatcggtgcgttgctggcctccggg
gcgacatttgccggcagagcactgcaggccaatgacatcgccgtgattgtcgagaagcac
aaggacgcgcgggcctgccatcgcgcgctcaccgacgccgggattcacgcggtctacacc
ggcgacaccgatgtgttcagctccgaagccgccgacgactggctagcgctgctggaggcg
ttcgaccagccgcatcgccccgggatcgtgcgcgccgccgccgcgacgatgtttttcggc
aagaccgccaacgatcttgcccgtggcggcgatgcgctcaccgatcgcgtcgcagagacc
ctgcgggagtgggcggactacgcccgcgagcggggggtggccgccatcttcgaggccgcg
cagttgggcggtatgagcgaccgcgtgctgtcgtggcaggagggccagcggcacatgacc
gacctggcccacgtgacgcagctgctgcaggaggtctcccaccgggagcgctataccctt
ccggcgctgcgagactggctgcgcggccagcgcgaggatcgcggtggcgctaccgaacgc
aaccgccggatcgatagcgacgccgcggccgtccagatcatgacggtgtgggtgagcaag
ggtctgcagtatccggtggtgtacctgccattcgccttcaaccgcaacattcaggaacgc
gaactggtgctgtttcacgaccggggcacgcgctgcctgcatatcggcggcaaggactcc
cccgatttcggcacggtcgagaggctgggcgccaaagaggctgccaacgacgacagccga
ttgacctacgttgcgatgacgcgggcccagtcgcaagtggtggcttggtggtcaccggcc
tatgacgaacccaacggcgggctgtcacggctgctgcggggccggcgtcccggcgactcg
gtggtacctgaccgcgccacccctgccaagatcaccgacgaggatgcctgggaccggttt
cagcaatggcaggccgccggagggccgacggtggaagagtccgtcatcgccccggcaccg
gcgattgccggccagccggcgccgtccgagctggccacccgccggtttgaccgcggcatc
gacatcaggtggcggcgcacgtcgtattcgggattgatcaggatggccgaggcgaccggc
gtcagcagtgagccggaggtgaccgaacgcgatgatgaagtcgccgaggttccgttgacc
gaggtggtgatgtccgggaccgagcagccttctcccatggcggatctcccatccggcgcg
aagttcggctcactggtgcacgccgtgctggagaccagcgatcccttcgccatcgatctc
gccgccgagctggaatcccagatccgggtgcaatccgcgtggtggccggtgcaggtgccc
gcagcccagcttgccgcggcgatggtcccgatgcacgacaccccgctgggcccgctggcc
ggcggattgacgctgcgccaaatcgggctaccggaccgattgcgggagatggacttcgag
tttccgttggccggaggcgatgaggctgatgccgggggccacgcacccgatctccggctg
gccgacgtcggggcgctgttgcgggcgcacctggacgcatccgacccgctggcgccatat
gccgatcggttgagcgggggcgcgcttggcggtcagtcgctgcgcgggtatctcagcggt
tcggtcgacgcggtgttacggattcccgacgggccgggccagcggtatctggtcgtcgac
tacaagaccaactggctgggtgaccccgaccgcccgttgaccgccgccgactaccaacgt
ccccggctgatcgaggcgatgctgcactccgactatccgttgcaggcattgctgtacacc
gttgtgctgcaccgttttctgcgctggcgccagccaggatacgatccggcccgacacctg
ggcggcgtgctgtacctgttcgtccgcgggatgtgtggtcccgacactcccatgctggac
ggacaccccgccggggtgttcagctggtcgcctccggccgctctggtggcggcgttgtcc
gatctgcttgatgcgggcagggccctcgcatga
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