Modestobacter marinus: MODMU_3911
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Entry
MODMU_3911 CDS
T02167
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmar
Modestobacter marinus
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmar03016
]
MODMU_3911
Enzymes [BR:
mmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MODMU_3911
Transfer RNA biogenesis [BR:
mmar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MODMU_3911
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
CCH89314
UniProt:
I4F101
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All DBs
Position
3876624..3877931
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AA seq
435 aa
AA seq
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MEFTEPTVPERTVPATTAPEVPVVGEPSVEQAPVDEAPAAVPLLAPRDGLLPVIETSTAL
VAYADALAAGSGPVAVDAERASGYRYGQSAYLVQLRRAGAGTGMIDPVPLPDLSVVQAAI
GDAEWVLHAANQDLPCLAELGLVPTRLFDTELAARLAGLPRVGLGAVVESLLGLSLQKGH
SAADWSTRPLPEDWLVYAALDVEVLVELRDALAAILDEQGKTEWARQEFEAILAAGPPAP
KVDPWRKTSGMHGLRSRRQLGMLRALWQARDELARRRDIAPGRVLPDTAMVSAVQADPTT
EAALLDLPVFRGRANRRLVGTWFGALVRGRELAEAELPLHSKPGEGPPPVNRWADRDPAA
AARLKAARASLAEVSERWSVPVENLLSPDLVRRLMWTPPTPADADALAAALRAGGAREWQ
IGLTRDLLTEAIAAG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ctggagttcaccgagcccaccgtccccgagcgcaccgtccccgcgaccaccgcccccgag
gtccccgtcgtcggggaaccgtcggtcgagcaggcgccggtcgacgaggcaccggccgcc
gtcccgctgctcgcgccccgggacgggctgctcccggtcatcgagacctccaccgcgctg
gtcgcctacgccgacgcgctggccgccggcagcggcccggtcgccgtcgacgccgagcgc
gcctccgggtaccggtacggccagagcgcctacctggtgcagctccgccgcgccggcgcg
ggcaccgggatgatcgacccggtgccgctgccggacctgtcggtcgtgcaggccgcgatc
ggcgacgccgagtgggtgctgcacgcggcgaaccaggacctgccctgcctggccgagctg
ggcctggtcccgacccggctgttcgacaccgagctggccgcccggctggccgggctgccg
cgggtcgggctgggcgcggtcgtggagtccctgctgggactgtcgctgcagaagggccac
tcggccgcggactggagcactcggccgctgccggaggactggctggtctacgcggcgctg
gacgtcgaggtgctggtcgagctgcgggacgcgctggcggccatcctcgacgagcagggc
aagaccgagtgggcgcggcaggagttcgaggcgatcctggccgcgggccccccggcgccc
aaggtcgacccgtggcggaagacgtcgggcatgcacgggctgcgcagccggcggcagctg
ggcatgctgcgggcgctctggcaggcccgcgacgagctggcccgccgccgggacatcgcc
cccggccgggtgctgccggacaccgccatggtctcggcggtgcaggccgacccgacgacc
gaggcggcgctgctggacctgccggtgttccgcggccgggccaaccgccggctcgtcggc
acctggttcggcgccctggtgcgcggtcgggagctggcggaggccgagctgccgctgcac
agcaagcccggtgagggcccgcccccggtgaaccgctgggccgaccgcgaccccgcggcg
gccgcccggctcaaggccgcccgggcctcgctggccgaggtgtccgagcggtggtcggtg
ccggtggagaacctgctctcccccgacctggtccgccggctgatgtggacgccgccgacg
ccggccgacgccgacgcgctggccgcggcgctgcgcgccggtggggctcgcgagtggcag
atcgggctcacccgcgacctgctgaccgaggcgatcgccgccggctga
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