KEGG   Myxococcus macrosporus: MYMAC_005859Help
Entry
MYMAC_005859      CDS       T05096                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmas  Myxococcus macrosporus
Pathway
mmas03030  DNA replication
mmas03410  Base excision repair
mmas03420  Nucleotide excision repair
mmas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYMAC_005859
   03410 Base excision repair
    MYMAC_005859
   03420 Nucleotide excision repair
    MYMAC_005859
   03430 Mismatch repair
    MYMAC_005859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmas03032]
    MYMAC_005859
   03400 DNA repair and recombination proteins [BR:mmas03400]
    MYMAC_005859
Enzymes [BR:mmas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MYMAC_005859
    6.5.1.6  DNA ligase (ATP or NAD+)
     MYMAC_005859
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MYMAC_005859
DNA replication proteins [BR:mmas03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MYMAC_005859
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MYMAC_005859
DNA repair and recombination proteins [BR:mmas03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MYMAC_005859
   NER (nucleotide excision repair)
    Other NER factors
     MYMAC_005859
   MMR (mismatch exicision repair)
    Other MMR factors
     MYMAC_005859
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ATB50204
UniProt: A0A250K2A1
LinkDB All DBs
Position
7322243..7323838
Genome map
AA seq 531 aa AA seqDB search
MRRLADLYETLDQTMSTNAKVEALARYFQEAPPEDAAWALYFLTGQKLKRLIPTKLLVGW
TQELTGIPGWLFEEVYASTGDLAEVIALLLDARERPARTEELPLSVWLEQRLLPLRRLDA
AGQREQVVSWWHAMPRRELFLLNKMLTGELRVGVSSTLVVRAVAQVAGLPAPSVAHRLMG
TWTPSATFFRQLVSQDVSDGDSSRPYPFYLASPLEQPAEDLGERAEWQVEWKWDGIRGQL
IRRKGSVHLWSRGEELITERFPEIANAAASLPEGTVLDGEVLAHADGRPLPFAQLQRRIG
RQKLTPKVLAEAPAAFMAYDVLELGGEDLRSQPLRERRAKLEALLQGMPRLPISPVVQAA
TWEDLATARGEARERNVEGFMLKRLASPYLTGRKRGDWWKWKIDPFTVDAVLLYAHPGHG
RRSSLYTDYTFAVWNGTELQPVTKAYSGLTDAEIGRLDRWIRAHTREKYGPVRSVEPEQV
FELHFEGIQPSPRHKSGVALRFPRIARWRTDKKPRDADTLDSLKELLHASG
NT seq 1596 nt NT seq  +upstreamnt  +downstreamnt
gtgcggcgactggccgacctctacgagacgctggaccagaccatgtccaccaacgccaag
gtggaggcgctcgcgcgctacttccaggaggcgccgccggaggacgcggcgtgggcgctc
tacttcctcacgggccagaagctgaagcggctgattcccacgaagctgctggtgggctgg
acccaggagctgacgggcatccccggctggctcttcgaggaggtgtacgcctccacgggc
gacctggcggaggtgattgccctgctgctggacgcacgggagcgcccggcgcgcaccgag
gagctgcccctgtccgtctggctggagcagcgcctgctgcccctgcggcggttggacgcc
gccgggcagcgcgagcaggtggtgtcctggtggcacgccatgccccggcgcgagctgttc
ctgctcaacaagatgctcaccggcgagctgcgcgtgggcgtgtcctccacgctggtggtc
cgcgcggtggcgcaggtggcggggctgcccgcgcccagcgtggcgcaccggctgatgggg
acgtggacgccctcggccaccttcttccggcagctcgtgtcgcaggacgtgtcggacggc
gacagctcccggccctaccccttctatctcgcctcaccgctggagcagcccgccgaggac
ctgggcgagcgggcggagtggcaggtggagtggaagtgggacggcatccgcggccagctc
atccgccgcaagggcagcgtgcacctgtggagccggggcgaggagctcatcaccgagcgc
ttccccgaaatcgccaacgccgcggcctcgctccccgaaggcacggtgctggacggcgag
gtgctggcccatgcggacggaaggcccctgcccttcgcgcagctccagcggcgaatcggc
cggcagaagctgacgcccaaggtgctggccgaggcgcccgcggccttcatggcgtacgac
gtgctggagctgggcggcgaggacctccggagtcagccgctgcgcgagcggcgcgcgaag
ctggaggcgctgctgcaaggcatgccgcggctgcccatctcccccgtcgtccaggcggcc
acgtgggaggacctggccacggcgcgaggcgaggcgcgcgagcgcaacgtcgagggcttc
atgctcaagcgcctggcgtcgccgtacctcaccgggcgcaagcggggcgactggtggaag
tggaagatcgacccgttcaccgtggacgcggtgctgctgtacgcacacccgggccacggc
cgacgctcgtcgctgtacaccgactacaccttcgcggtgtggaacggcacggagctgcaa
ccggtgacgaaggcctactccggcctgacggacgcggagattggccggctggaccggtgg
attcgcgcgcacactcgagagaagtacggccccgtgcgctcggtggagcccgagcaggtc
ttcgagctgcacttcgagggcatccagccctcgccgcgccacaagtcgggcgtcgcgctg
cgcttcccccgcatcgcgcgctggcggacggacaagaagccgcgggacgcggacacgctc
gactcgctcaaggagctgctccatgccagcgggtag

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