Methanococcus maripaludis X1: GYY_02360
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Entry
GYY_02360 CDS
T01584
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GYY_02360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmd03019
]
GYY_02360
03009 Ribosome biogenesis [BR:
mmd03009
]
GYY_02360
Enzymes [BR:
mmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GYY_02360
Messenger RNA biogenesis [BR:
mmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GYY_02360
Ribosome biogenesis [BR:
mmd03009
]
Prokaryotic type
rRNA helicases
GYY_02360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
AAA_30
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AEK19355
UniProt:
G0H3G5
LinkDB
All DBs
Position
446133..447749
Genome browser
AA seq
538 aa
AA seq
DB search
MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP
ILETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELRR
GVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVNTDKRML
LFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEK
EFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDV
AARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIA
KTEIKREEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKMASDLLEDADPQEVLSAVL
KYSLKDELSESNYKKIGRGSQRSERSGRNDSRGRRSFAPGENVRLFVALGKLDKMNPKKL
VDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEIILDSFKNERRGRRSIIEVASGN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttaaaaatttaggtctatctgacgagatattagaagcattagaaaagaaa
ggcttcacaaacccaacccctattcaggaacaagcaattcctattttaattgaaggaaaa
agagatattgtcggccaagctcaaacaggtactggaaaaaccgcagcatttggtattcct
attttagaaacaattgatgaacactcaaggaacacgcaagcacttattttagcacctaca
agagaactcgcaatacaagttgcagaagaaatcgattcaatcaaaggttcaaaaagattg
aatgttttcccagtatacggcggtcaatcaattgacagacagataagagaattaagaaga
ggagttcagattgttgttggaactcctggaagaatacttgatcacatctcaagaagaaca
ataaaacttgaaaacgtttcatatgtagttttagatgaagctgatgaaatgttaaacatg
ggattcattgacgatgttgaagaaatcttaaaatcagtaaacactgacaaaagaatgctt
ttattctcagcaacacttcctgatagtatcatgaaacttgctaaaaattacatgagagaa
tacgacatcatcaaagttaaaagacagcagcttacaactactttaactgatcaatcattc
tatgaaattcactcaagagataaatttgaattactttcaagaatcattgacacggaaaaa
gaattttacggtttaatcttctgtaaaacaaaagcagacgttgacgaagttgcaaacaga
ttgaatgagaaagggtatgctgcagaaggtcttcacggggacatgacccaagctcaaaga
gaaaaaacactcgacaaatttaaaggaaagaaaattaacgttctcgtagcaactgatgtt
gcagcaagaggaattgatatcaacgatttaacacacgttgtaaactttgatattccacaa
aatcctgaatcatacgtccacagaattggaagaacaggccgagctggaaaacaaggttat
gcaattacatttgttgaaccttcagaatttaggaagtttaaatacatccaaaaaattgca
aaaactgaaattaaaagagaagaagttcctgatgttaaagatataatcagcgctaaaaaa
ataaaaatcatttccggaataaaagaagttttagaatctggaaaatacgctgactgcgaa
aaaatggcttctgatttattagaagatgcagatcctcaagaagttctttcagcagtttta
aaatattctttaaaagatgaattaagtgaatcaaactacaaaaaaattggaagaggttca
caaagatctgaaagatctggaagaaatgacagcagaggaagaagatctttcgcacctggt
gaaaacgtaagactctttgtagctcttggtaaacttgataaaatgaaccctaaaaaatta
gtggatcacatttcaagaaaatccgatgttaaaggaagagacatcgacgatgtaaaagta
tttgagaaattttcctttgtaacggtatcttcaagcgatgcagaaataattcttgattca
ttcaagaatgaaagaagaggaagaagatcaataatcgaagttgcaagcggcaactaa
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