Methanothermobacter marburgensis: MTBMA_c00100
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Entry
MTBMA_c00100 CDS
T01297
Name
(GenBank) predicted single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmg
Methanothermobacter marburgensis
Pathway
mmg03410
Base excision repair
mmg03430
Mismatch repair
mmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTBMA_c00100
03430 Mismatch repair
MTBMA_c00100
03440 Homologous recombination
MTBMA_c00100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmg03400
]
MTBMA_c00100
DNA repair and recombination proteins [BR:
mmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MTBMA_c00100
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MTBMA_c00100
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTBMA_c00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
Motif
Other DBs
NCBI-ProteinID:
ADL57622
UniProt:
D9PYS7
LinkDB
All DBs
Position
complement(9915..11291)
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AA seq
458 aa
AA seq
DB search
MTHRKQPYSLSKLPDSILKRGSEASKLLEEHLEKGSIIRVISHNDADGLSAAGVVARAIS
SRNGQFHISILSRLRKEFIKKLGREKYSLFFFCDMGSAYLEEISRLKADIIVADHHQPSE
FEADSNVVHVNPHLHGLDGSRDLSASGAAYLATRNISRNTGQLALVGALGDMQYSDGFTG
ANRFIMDEAIEAGVLQVHSDLKLASRYTEPLYRSIAYTFNPPLPGLTGDIEASKGFLERI
GVSYGIKYADISPEEKDILRDELSRINPDIFGEVFTSREFQPAVGDLSDFAGILDACGKN
RKYGIGIGLCLGEGEGALEVGLELQKNYREELIRGLAWIRREGSTVMENIQYIYSEDRVF
KGIMGTIASISLSLKLLNPDIPLLGLSRMDQHVKVSARTTRPAVERGVNLGAALRDAASS
FGGTGGGHDIAAGAMVPYRDMESFLQLVDEITGAQIKS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagaaagcagccctactcgttaagtaaactccccgactcaattttaaagagg
gggtcagaggcctcaaaactccttgaggagcacctggagaaggggagcataatacgggtc
atatcccacaacgatgccgacggcctgtcggccgcaggagttgttgcacgggccatttca
tcaagaaacggccagttccacatctccatcctttcaagactcaggaaggagttcataaaa
aagcttggaagggagaagtactccctcttctttttctgtgacatgggaagcgcctacctt
gaggagatatcaaggctcaaggccgatatcatagttgccgaccatcaccagccctctgaa
tttgaggccgattccaacgttgtacacgtgaacccccaccttcatggccttgatgggagc
agggacctcagcgcctcgggtgcagcctacctggcaaccaggaacatcagcagaaatacg
gggcagctggccctggttggagccctgggcgatatgcagtacagtgatggtttcacaggt
gcaaaccgtttcataatggatgaggcgattgaagcaggggtcctgcaggttcacagcgac
ctcaaactggcatcaagatacaccgagcccctttaccgttccattgcatacacattcaat
ccccctctccccggattaacaggggacattgaggcttcaaaaggttttcttgagcgtata
ggagtctcctatgggataaaatacgctgacatctcaccagaggagaaggacatcctcagg
gatgagctatcaaggataaaccccgatatattcggtgaggttttcacttcaagggagttt
cagccagccgttggtgacctgtctgattttgcagggattcttgatgcctgtggaaagaac
cgtaaatacggcattggaataggtctatgccttggtgagggtgaaggtgcccttgaagtg
ggccttgaactccagaaaaactaccgtgaagagctcataaggggccttgcatggatcagg
agagagggctccactgtaatggagaatatacagtacatttacagtgaggacagggtcttt
aaggggataatggggaccatagcaagcatatcactctccctgaaactgctgaaccctgat
attccactccttggtctttcaaggatggaccagcatgtgaaggtatctgcaaggaccacg
agaccggctgttgagaggggtgttaatctcggggccgccctcagggatgcagcatccagt
tttggtggtacaggtggcgggcatgatatagcggccggtgccatggtaccctacagggat
atggagagtttcctccagctggtggatgaaataacaggtgcacagattaaatcgtga
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