Candidatus Midichloria mitochondrii: midi_01035
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Entry
midi_01035 CDS
T01561
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmn
Candidatus Midichloria mitochondrii
Brite
KEGG Orthology (KO) [BR:
mmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmn03032
]
midi_01035 (topA)
03400 DNA repair and recombination proteins [BR:
mmn03400
]
midi_01035 (topA)
Enzymes [BR:
mmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
midi_01035 (topA)
DNA replication proteins [BR:
mmn03032
]
Prokaryotic type
DNA Topoisomerases
midi_01035 (topA)
DNA repair and recombination proteins [BR:
mmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
midi_01035 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_C_rpt
zf-C4_Topoisom
Motif
Other DBs
NCBI-ProteinID:
AEI89313
UniProt:
F7XTV4
LinkDB
All DBs
Position
979879..982254
Genome browser
AA seq
791 aa
AA seq
DB search
MNLLIVESPAKAKTIGKYLGPSYKVISSYGHVRALPSEEGAVDPEHDFAMRYEIPPKAAK
QIAAIVAEAKHSDHIYLATDPDREGEAISWHVLEILKQKKAIKNSTKVYRAVFHEITKKA
IADSLKTPRDLNNDLVSAQKTRQGLDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRMICE
REAEIESFKSQEYWSIHGRFSTEKGEEFDSTLIEFQGKKLEKFTTVNEAQAADVISKIKD
NSFSVKRVEKKKVNRNPQAPFSTSTMIQEASRKLGFSAKKTAQIAQKLYEGININGELTG
LITYMRTDSTSISAEATKAASELITKIYGSNYLPPSPRVYKTKTKNAQEAHEAIRPTDVF
KKPESIKSFLEEDQFKLYELIWNRLVASQMASAILDVMTVDIADDQGNTFRATGSSIAFS
GFYKVYREGIDDADEEKDRILPILKEKELLKLLEAIKEQHFTQPPPRYTEASLVKRMEEL
GIGRPSTYPTIISILQDRKYVIFEKKRFIPEPRGRLVNTFLTLFFNQYVEYGFTANLEEQ
LDEIAAGKVIWKKVMKDFWYPFKNKTDEVLSIKTSEILAKMEEQLLNYLFHKEILQDSKS
IEEVLKCSKCVTGKLQLKNGRFGSFLACSNYPNCNYTKAIGSNDNNMQDTCNEPAVADLP
KVLGTDPNTKEEVSIRKGPYGFYVQRGEGKKVKRTGLPKDLNYQNIDLNYAIGLLNMPRE
LGLDQEGVLIRAGAGKFGPYLERSGKYISLRTARIDPVLITLEEALGIIKKSSSDKKDKS
SQGKRSAKATI
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttaatagtagaatcgccagcaaaggctaaaaccataggcaaatatctgggc
cccagttataaagttatatcttcttatggacacgtcagagcattaccttcagaagaagga
gcagtcgaccctgagcacgatttcgcaatgcgttacgaaatccccccaaaagctgcaaag
cagattgcagcaattgtggctgaagctaaacactccgaccatatatacctggcaaccgac
ccagaccgagaaggagaagctatatcctggcacgtcctagaaatccttaagcaaaaaaaa
gctataaaaaactctaccaaagtctatagggcagtctttcatgaaataactaaaaaagca
atagcggattcattaaaaacccctagagatctcaataatgatctcgttagcgctcaaaaa
acaagacaaggcttagactatttagttggttttacactgtccccagtattatggagaaag
ctgcctggtagcaggtctgctggtcgtgttcaatcagttgctcttagaatgatatgcgaa
agagaagctgaaatagaaagttttaagagtcaagaatattggagcattcatggacgtttt
tctaccgaaaaaggggaggaatttgatagtaccttaatagaatttcagggcaaaaaactc
gaaaaatttactacagtaaatgaagctcaagctgctgacgtaatctccaaaattaaggat
aatagctttagtgtaaaaagagtcgaaaagaaaaaagttaatagaaatcctcaggctcct
ttctccacctcaactatgattcaagaagcatcaagaaagttagggttttctgctaaaaaa
actgcacaaattgctcaaaaattatatgaaggtattaacataaatggcgagttaactggt
ctgataacctatatgagaacagatagcactagtatttcagcagaggctacaaaagctgca
agtgaactaatcactaaaatatacggtagcaattatttacccccttctccaagagtttac
aagaccaaaaccaagaacgcgcaagaagctcatgaggcaattaggcccacagatgtattt
aaaaaacctgaaagcatcaaaagctttttagaagaagaccaatttaaactatatgaattg
atatggaacaggctggttgcaagccagatggctagcgcgattttggatgttatgaccgta
gatatcgctgatgatcaaggaaacacatttagagccaccggatcatccattgcgttctct
ggtttttacaaagtttatcgagaaggtattgatgatgctgatgaagaaaaagataggatc
ttaccaatcttaaaagaaaaagaattattaaaattattagaagcaataaaagagcaacac
tttacccaaccccctccgcgctatacagaagctagtttggtaaaaagaatggaagagcta
ggtattggcaggccttctacatatcctacaatcatctcaattcttcaagatagaaaatat
gttatttttgagaagaaacggtttataccagagcccaggggcagattagtaaataccttt
ttaactttgttttttaatcaatacgtagaatacggcttcacagctaatttagaggagcag
cttgatgaaattgccgctggcaaagttatatggaaaaaagtcatgaaagatttttggtat
cccttcaaaaataaaactgatgaggttttatccataaaaacttcagaaatattagccaaa
atggaagagcaattattaaactacttattccacaaagaaattctgcaggatagtaaatct
atcgaagaagtacttaaatgtagcaaatgcgttaccggaaaactgcagttaaaaaacgga
cgttttgggtcatttctagcctgctctaattatccaaactgtaattataccaaagcaatc
ggttcaaatgataacaacatgcaagatacttgtaacgagccagcggtcgccgacttgcca
aaagttctcggcactgatcccaatactaaagaagaagtttcaattagaaaggggccgtat
ggattttatgtccaacgaggagagggcaaaaaagttaaaagaacaggcttacctaaggat
ttgaattatcagaatatagatttgaattatgctattggtttgttgaacatgccaagagaa
ctcggacttgaccaagagggagtattaataagggctggtgctggaaaatttggcccttat
ttagagcgaagtggtaaatatatttcattacgaacggctcgaatagatccagttttgatc
acccttgaagaagcccttggcataattaaaaaaagttcgtccgataaaaaggataagagt
tctcaggggaaaaggtctgcaaaggctactatttaa
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