Candidatus Methylospira mobilis: F6R98_16910
Help
Entry
F6R98_16910 CDS
T06248
Name
(GenBank) PAS domain S-box protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
mmob
Candidatus Methylospira mobilis
Brite
KEGG Orthology (KO) [BR:
mmob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmob03000
]
F6R98_16910
Transcription factors [BR:
mmob03000
]
Prokaryotic type
Helix-turn-helix
Other families
F6R98_16910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
AAA_5
HTH_8
Mg_chelatase
AAA
bpMoxR
MCM
AAA_3
MLTR_LBD
AAA_16
AAA_2
AAA_7
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QFY44102
UniProt:
A0A5Q0BLU0
LinkDB
All DBs
Position
complement(3725365..3727203)
Genome browser
AA seq
612 aa
AA seq
DB search
MPRQLIKPNTFAEHLLQHLPVPTFVLDSGHRVILWNSACEALTGCRAADIIGSNRHWQGF
YTLERPCLADVLLDEALACRLPALYEKTSANATPGIATLHTENWCVMPDGRKLYLVIDAG
PIINEAGEVIAVVETQRDRTEQRLMMQALEESEQRFASIVSSAMDAIVGIDHQKKITLFN
PAAERIFQCSQDLAVGQLLERFIAPRCRSLFERFLALDDPAAKKPIWVAEGLYARRANSE
EFPIEATLSPLSVDGEQRYTVILRDVNERKQAEQTLTRLQQEKGYLQEFINTEHNLGDIV
SASAEMQAVFEQVRMVAITDTPVLLLGETGTGKELLARAIHELSDRRAALLVKVNCAALP
SELIESELFGHEKGAFTGATQQRKGRFELANGGTLFLDEVGELTAAAQAKLLRVLQEQEF
ERVGGSVTLKVDVRIIAATNRSLADEIAQGRFRADLYYRLNVFPIEVPALRERSTDIPLL
ARFFLDKYARKFGKRIRDVSALSLRRLLEYSWPGNVRELQNVIERAVILSSGPLLEVGQL
LASHKSDDDAAQPGAETLAEVERSHILRTLEETGGVIAGPAGAAVRLGLNPNTLRSKMLK
LGIGRPLMLQQD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcagttgataaagcccaacacattcgcagaacacctgttgcagcatttgccc
gtccctacttttgtactggatagcggacaccgggttattttgtggaatagcgcctgcgaa
gcgctaaccggatgccgggccgccgatataatcggcagtaaccggcattggcaggggttt
tatacgcttgagcggccttgtcttgccgatgttctgctggatgaagcgctggcatgccgg
cttccggcgctgtatgaaaaaacctccgcgaacgctacgcccggcattgccactctgcat
acggaaaactggtgcgtgatgccggatggccgcaagctgtatctggtgatcgatgccgga
ccgatcatcaacgaggccggtgaggtgattgccgtagtggaaacgcagcgcgatcgtaca
gagcaacgtttgatgatgcaggccctggaggaaagcgagcaaagattcgcatccatcgtc
agttcggcgatggatgcgattgtcggcatcgatcatcagaaaaaaatcaccctgtttaat
cccgcggccgaacgcatattccagtgttcgcaggatctggctgtcggtcaactcctggag
cgcttcattgcgccgcgttgccgtagtctttttgaacgttttttagcgctggacgatcct
gcagccaaaaaaccgatatgggtagcggaaggtttatacgcgcgccgcgccaactccgaa
gagtttccgatagaggcgacattatcacccttaagcgtggacggggaacagcgttatacg
gttattttacgcgatgtgaacgagcgtaagcaggcggaacaaactctgactcgcttgcag
caagagaagggttatctgcaggagttcattaataccgagcataatctgggcgacatagtc
agcgcctccgccgaaatgcaggcggtgttcgagcaagtgcgtatggtggcaatcaccgat
actccggtgctgttgctgggagaaaccggaaccggaaaagaattgttggcgcgtgcgatt
catgagttgagcgaccgccgcgccgcgctgctggtcaaagtcaattgcgccgcgctgccc
agcgaattgatagaaagcgaattattcggacacgaaaagggtgcgtttaccggcgcgacg
caacaacgcaagggacgtttcgagctggctaacggcggcacattgtttctggacgaggtc
ggcgaattgacggcggcggcccaggccaaattattgcgggtattgcaggagcaggaattc
gagcgtgtgggcggcagcgtaacgctgaaggtcgatgtgcgcatcatcgccgcgaccaac
cgcagtctggccgatgaaatcgcgcagggacggttccgcgccgatttgtactaccggttg
aatgtgtttcccatcgaagtgccggcattgcgcgagcgtagtaccgatatcccgttgctg
gcgcgtttttttctggataaatacgcgcgaaaattcggcaagcgcatacgcgatgtttcc
gcgctgtcgctgcggcgtttgctggagtattcctggcccggcaatgtgcgcgaactgcaa
aacgtgatcgaacgcgcggtgatactcagcagcggcccgctgctggaagtggggcagttg
ctggcctcgcacaagtcggatgacgacgcggcccagccgggcgcggaaaccctggccgag
gtcgagcgcagccatatactgcgcacgctggaagaaaccggcggcgtcattgccggccct
gcgggcgcggcggtcaggctggggttgaatccgaatacgctgcgttcgaaaatgttgaag
ctgggtatcggcaggccgttgatgctgcaacaggattag
DBGET
integrated database retrieval system