Mus musculus (house mouse): 18423
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Entry
18423 CDS
T01002
Symbol
Otx1, A730044F23Rik, jv
Name
(RefSeq) orthodenticle homeobox 1
KO
K09326
homeobox protein OTX1
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
18423 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
18423 (Otx1)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
18423 (Otx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
18423
NCBI-ProteinID:
NP_035153
MGI:
97450
Ensembl:
ENSMUSG00000005917
UniProt:
P80205
Q5SS54
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All DBs
Position
11:complement(21944764..21954044)
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AA seq
355 aa
AA seq
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MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKTRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPTSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPAPSS
SYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPAAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcacccctccgtgggctaccctgccaccccgcggaagcagcgacgg
gagcgcaccaccttcacgcgctcacagctggacgtgctcgaggcgctgttcgcaaagact
cgctacccagacatcttcatgcgcgaggaggtggcactcaagatcaacctgccagagtcc
agagtccaggtttggttcaagaaccgccgcgccaagtgccgccagcagcagcagagcggg
aatggaacgaaaacccggccggtcaagaagaagtcgtctccagtacgcgagagctcgggt
tcagagagcagcggccagttcacgccgcccgccgtatctagctctgcttcttcgtctagc
tcagcgtccagtgcctccgccaaccccgcggctgctgcggccgcgggcctgggtgggaac
ccagtggcagcagcgtcctctctgagcacgcctactgcttcgtccatctggagcccggcc
tccatctcgccgggctcagcgccgacatccgtatcggtgccagagccactggccgctccg
agcaacgcctcgtgcatgcagcgctcggtagccgcaggtgcggccactgccgcagcctcc
taccctatgtcctatggccagggcggaagctatggtcagggataccccgcgccctcctct
tcttactttggcggtgtagactgcagctcctacctagcgcccatgcactctcatcaccac
ccgcaccagcttagccccatggcaccctcctccatggctggccatcatcaccatcaccct
catgcgcaccacccactgagccaatcttcaggccaccaccaccaccatcaccaccaccac
caccaccaaggttatggaggctctgggctcgccttcaattctgccgattgcttggattac
aaggagcccgccgccgccgctgcttcctctgcctggaaactcaatttcaactctcccgac
tgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga
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