Mus musculus (mouse): 20181 Entry 20181             CDS       T01002                                  Gene name Rxra, 9530071D11Rik, Nr2b1, RXRalpha1 Definition (RefSeq) retinoid X receptor alpha   KO K08524   retinoid X receptor alpha Organism mmu  Mus musculus (mouse) Pathway mmu03320   PPAR signaling pathway mmu04151   PI3K-Akt signaling pathway mmu04659   Th17 cell differentiation mmu04919   Thyroid hormone signaling pathway mmu04920   Adipocytokine signaling pathway mmu04928   Parathyroid hormone synthesis, secretion and action mmu04932   Non-alcoholic fatty liver disease (NAFLD) mmu04976   Bile secretion mmu05160   Hepatitis C mmu05200   Pathways in cancer mmu05202   Transcriptional misregulation in cancer mmu05216   Thyroid cancer mmu05222   Small cell lung cancer mmu05223   Non-small cell lung cancer mmu05226   Gastric cancer Brite KEGG Orthology (KO) [BR:mmu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     20181 (Rxra)  09150 Organismal Systems   09151 Immune system    04659 Th17 cell differentiation     20181 (Rxra)   09152 Endocrine system    04920 Adipocytokine signaling pathway     20181 (Rxra)    03320 PPAR signaling pathway     20181 (Rxra)    04919 Thyroid hormone signaling pathway     20181 (Rxra)    04928 Parathyroid hormone synthesis, secretion and action     20181 (Rxra)   09154 Digestive system    04976 Bile secretion     20181 (Rxra)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     20181 (Rxra)    05202 Transcriptional misregulation in cancer     20181 (Rxra)   09162 Cancer: specific types    05226 Gastric cancer     20181 (Rxra)    05216 Thyroid cancer     20181 (Rxra)    05222 Small cell lung cancer     20181 (Rxra)    05223 Non-small cell lung cancer     20181 (Rxra)   09167 Endocrine and metabolic disease    04932 Non-alcoholic fatty liver disease (NAFLD)     20181 (Rxra)   09172 Infectious disease: viral    05160 Hepatitis C     20181 (Rxra)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mmu03000]     20181 (Rxra)   09183 Protein families: signaling and cellular processes    03310 Nuclear receptors [BR:mmu03310]     20181 (Rxra) Transcription factors [BR:mmu03000]  Eukaryotic Type   Zinc finger    Cys4 hepatocyte nuclear factor 4-like     20181 (Rxra) Nuclear receptors [BR:mmu03310]  2. Hepatocyte nuclear factor 4 like   2B. Retinoid X receptor (RXR)    20181 (Rxra) SSDB Motif Pfam:  Hormone_recep Nuc_recep-AF1 zf-C4 Other DBs NCBI-GeneID:  20181 NCBI-ProteinID:  NP_035435 MGI:  98214 Ensembl:  ENSMUSG00000015846 Vega:  OTTMUSG00000012047 UniProt:  P28700 A2AJP1 Q3UMU4 LinkDB Structure PDB:  1DKF 3A9E 1XDK Position 2 A3; 2 19.38 cM AA seq 467 aa MDTKHFLPLDFSTQVNSSSLNSPTGRGSMAVPSLHPSLGPGIGSPLGSPGQLHSPISTLS SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSTEDIKPPLGLNG VLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI LEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRF AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQAT NT seq 1404 nt   +upstreamnt  +downstreamnt atggacaccaaacatttcctgccgctcgacttctctacccaggtgaactcttcgtccctc aactctccaacgggtcgaggctccatggctgtcccctcgctgcacccctccttgggtccg ggaatcggctctccactgggctcgcctgggcagctgcactctcctatcagcaccctgagc tcccccatcaatggcatgggtccgcccttctctgtcatcagctcccccatgggcccgcac tccatgtcggtacccaccacacccacattgggcttcgggactggtagcccccagctcaat tcacccatgaaccctgtgagcagcactgaggatatcaagccgccactaggcctcaatggc gtcctcaaggttcctgcccatccctcaggaaatatggcctccttcaccaagcacatctgt gctatctgtggggaccgctcctcaggcaaacactatggggtatacagttgtgagggctgc aagggcttcttcaagaggacagtacgcaaagacctgacctacacctgccgagacaacaag gactgcctgatcgacaagagacagcggaaccggtgtcagtactgccgctaccagaagtgc ctggccatgggcatgaagcgggaagctgtgcaggaggagcggcagcggggcaaggaccgg aatgagaacgaggtggagtccaccagcagtgccaacgaggacatgcctgtagagaagatt ctggaagccgagcttgctgtcgagcccaagactgagacatacgtggaggcaaacatgggg ctgaaccccagctcaccaaatgaccctgttaccaacatctgtcaagcagcagacaagcag ctcttcactcttgtggagtgggccaagaggatcccacacttttctgagctgcccctagac gaccaggtcatcctgctacgggcaggctggaacgagctgctgatcgcctccttctcccac cgctccatagctgtgaaagatgggattctcctggccaccggcctgcacgtacaccggaac agcgctcacagtgctggggtgggcgccatctttgacagggtgctaacagagctggtgtct aagatgcgtgacatgcagatggacaagacggagctgggctgcctgcgagccattgtcctg ttcaaccctgactctaaggggctctcaaaccctgctgaggtggaggcgttgagggagaag gtgtatgcgtcactagaagcgtactgcaaacacaagtaccctgagcagccgggcaggttt gccaagctgctgctccgcctgcctgcactgcgttccatcgggctcaagtgcctggagcac ctgttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatggagatgctg gaggcaccacatcaagccacctag

Mus musculus (mouse): 20182 Entry 20182             CDS       T01002                                  Gene name Rxrb, AL023085, H-2RIIBP, Nr2b2, RCoR-1, Rub Definition (RefSeq) retinoid X receptor beta   KO K08525   retinoid X receptor beta Organism mmu  Mus musculus (mouse) Pathway mmu03320   PPAR signaling pathway mmu04659   Th17 cell differentiation mmu04919   Thyroid hormone signaling pathway mmu04920   Adipocytokine signaling pathway mmu04928   Parathyroid hormone synthesis, secretion and action mmu05200   Pathways in cancer mmu05202   Transcriptional misregulation in cancer mmu05216   Thyroid cancer mmu05222   Small cell lung cancer mmu05223   Non-small cell lung cancer mmu05226   Gastric cancer Brite KEGG Orthology (KO) [BR:mmu00001]  09150 Organismal Systems   09151 Immune system    04659 Th17 cell differentiation     20182 (Rxrb)   09152 Endocrine system    04920 Adipocytokine signaling pathway     20182 (Rxrb)    03320 PPAR signaling pathway     20182 (Rxrb)    04919 Thyroid hormone signaling pathway     20182 (Rxrb)    04928 Parathyroid hormone synthesis, secretion and action     20182 (Rxrb)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     20182 (Rxrb)    05202 Transcriptional misregulation in cancer     20182 (Rxrb)   09162 Cancer: specific types    05226 Gastric cancer     20182 (Rxrb)    05216 Thyroid cancer     20182 (Rxrb)    05222 Small cell lung cancer     20182 (Rxrb)    05223 Non-small cell lung cancer     20182 (Rxrb)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mmu03000]     20182 (Rxrb)   09183 Protein families: signaling and cellular processes    03310 Nuclear receptors [BR:mmu03310]     20182 (Rxrb) Transcription factors [BR:mmu03000]  Eukaryotic Type   Zinc finger    Cys4 hepatocyte nuclear factor 4-like     20182 (Rxrb) Nuclear receptors [BR:mmu03310]  2. Hepatocyte nuclear factor 4 like   2B. Retinoid X receptor (RXR)    20182 (Rxrb) SSDB Motif Pfam:  Hormone_recep zf-C4 Nuc_recep-AF1 Other DBs NCBI-GeneID:  20182 NCBI-ProteinID:  NP_035436 MGI:  98215 Ensembl:  ENSMUSG00000039656 Vega:  OTTMUSG00000037107 UniProt:  P28704 LinkDB Position 17 B1; 17 17.98 cM AA seq 520 aa MSWATRPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAGEQQALEP EPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGIRPSSPPGPPLTPSAPPPPMPPPPLGSPF PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP PPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQ RNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRILEAELAVEQ KSDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLR AGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRM DKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRL PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA NT seq 1563 nt   +upstreamnt  +downstreamnt atgtcttgggccactcgtccgcccttcctcccgccgcggcatgccgcggggcagtgtggg ccggtgggggtgagaaaagagatgcattgtggggtcgcgtcccggtggcggcggcggcgg ccctggctggatcccgcggcggcggcggcggcggccggagagcagcaagccctggagccg gagccgggggaggctggccgggacgggatgggcgacagcgggcgggattcccgaagccca gacagctcctccccaaatcccctttctcaggggatccgtccgtcttctcctcctggccca cctcttaccccttcagcacctccacctccaatgccacccccgccactgggctcccccttc ccagtcatcagttcttccatggggtcccctggtctgccccctccggctcccccaggattc tccgggcctgtcagcagccctcagatcaactccacagtgtcgctccctgggggtgggtct ggcccccctgaagatgtgaagccaccggtcttaggggtccggggcctgcactgtccaccc cctccaggtggtcctggggctggcaaacggctctgtgcaatctgcggggaccgaagctca ggcaagcactatggggtttacagctgcgagggctgcaagggtttcttcaagcgcaccatt cggaaggacctgacctactcgtgtcgtgataacaaagactgtacagtggacaagcgccag cggaatcgctgtcagtactgtcgctatcagaagtgcctggccactggcatgaaaagggag gcggttcaggaggagcgtcaacgggggaaggacaaagacggggatggagatggggctggg ggagcccctgaggagatgcctgtggacaggatcctggaggcagagcttgctgtggagcag aagagtgaccaaggcgttgagggtcctggggccaccgggggtggtggcagcagcccaaat gacccagtgactaacatctgccaggcagctgacaaacagctgttcacactcgttgagtgg gcaaagaggatcccgcacttctcctccctacctctggacgatcaggtcatactgctgcgg gcaggctggaacgagctcctcattgcgtccttctcccatcggtccattgatgtccgagat ggcatcctcctggccacgggtcttcatgtgcacagaaactcagcccattccgcaggcgtg ggagccatctttgatcgggtgctgacagagctagtgtccaaaatgcgtgacatgaggatg gacaagacagagcttggctgcctgcgggcaatcatactgtttaatccagacgccaagggc ctctccaaccctggagaggtggagatccttcgggagaaggtgtacgcctcactggagacc tattgcaagcagaagtaccctgagcagcagggccggtttgccaagctgctgttacgtctt cctgccctccgctccatcggcctcaagtgtctggagcacctgttcttcttcaagctcatt ggcgacacccccattgacaccttcctcatggagatgcttgaggctccccaccagctagcc tga

Mus musculus (mouse): 20183 Entry 20183             CDS       T01002                                  Gene name Rxrg, Nr2b3 Definition (RefSeq) retinoid X receptor gamma   KO K08526   retinoid X receptor gamma Organism mmu  Mus musculus (mouse) Pathway mmu03320   PPAR signaling pathway mmu04659   Th17 cell differentiation mmu04919   Thyroid hormone signaling pathway mmu04920   Adipocytokine signaling pathway mmu04928   Parathyroid hormone synthesis, secretion and action mmu05200   Pathways in cancer mmu05202   Transcriptional misregulation in cancer mmu05216   Thyroid cancer mmu05222   Small cell lung cancer mmu05223   Non-small cell lung cancer mmu05226   Gastric cancer Brite KEGG Orthology (KO) [BR:mmu00001]  09150 Organismal Systems   09151 Immune system    04659 Th17 cell differentiation     20183 (Rxrg)   09152 Endocrine system    04920 Adipocytokine signaling pathway     20183 (Rxrg)    03320 PPAR signaling pathway     20183 (Rxrg)    04919 Thyroid hormone signaling pathway     20183 (Rxrg)    04928 Parathyroid hormone synthesis, secretion and action     20183 (Rxrg)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     20183 (Rxrg)    05202 Transcriptional misregulation in cancer     20183 (Rxrg)   09162 Cancer: specific types    05226 Gastric cancer     20183 (Rxrg)    05216 Thyroid cancer     20183 (Rxrg)    05222 Small cell lung cancer     20183 (Rxrg)    05223 Non-small cell lung cancer     20183 (Rxrg)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:mmu03000]     20183 (Rxrg)   09183 Protein families: signaling and cellular processes    03310 Nuclear receptors [BR:mmu03310]     20183 (Rxrg) Transcription factors [BR:mmu03000]  Eukaryotic Type   Zinc finger    Cys4 hepatocyte nuclear factor 4-like     20183 (Rxrg) Nuclear receptors [BR:mmu03310]  2. Hepatocyte nuclear factor 4 like   2B. Retinoid X receptor (RXR)    20183 (Rxrg) SSDB Motif Pfam:  Hormone_recep Nuc_recep-AF1 zf-C4 Other DBs NCBI-GeneID:  20183 NCBI-ProteinID:  NP_033133 MGI:  98216 Ensembl:  ENSMUSG00000015843 Vega:  OTTMUSG00000022560 UniProt:  P28705 LinkDB Position 1 H2.3; 1 74.99 cM AA seq 463 aa MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSVALPTGKPMDSHPSYTDTPVSAPRTLSAVG TPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSSSEDIKPLPGLPG IGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKD CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHEDMPVERIL EAELAVEPKTESYGDMNVENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL LRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEMLETPLQIT NT seq 1392 nt   +upstreamnt  +downstreamnt atgtatggaaattattcccacttcatgaagtttcccaccggctttggtggctcccctggt cacactggctcgacgtccatgagcccttcagtagccttgcccacggggaagccaatggac agccaccccagctacacagacaccccagtgagtgcccctcggacgctgagtgctgtggga acccccctcaatgctcttggctctccgtatagagtcatcacttctgccatgggtccaccc tcaggagcactggcagctcctccaggaatcaacttggtggctccacccagctcccagcta aatgtggtcaacagtgtcagcagctctgaggacatcaagcccttaccaggtctgcctggg attggaaatatgaactacccatccaccagccctgggtctctggtgaaacacatctgtgcc atctgtggggacagatcctcagggaagcactacggtgtgtacagctgtgaaggttgcaaa ggcttcttcaaaaggaccatcaggaaagatctcatctacacctgtcgggataacaaagat tgtctcatcgacaagcgccagcgcaaccgctgccagtactgtcgctaccagaagtgcctg gtcatgggcatgaagcgggaagctgtgcaagaagaaaggcagaggagccgagagcgagca gagagtgaggcagaatgtgccagtagtagccacgaagacatgcccgtggagaggattcta gaagccgaacttgctgtggaaccaaagacagaatcctacggtgacatgaacgtggagaac tcaacaaatgaccctgttaccaacatatgccatgctgcagataagcaacttttcaccctc gttgagtgggccaaacgcatcccccacttctcagatctcaccttggaggaccaggtcatt ctactccgggcagggtggaatgaactgctcattgcctccttctcccaccgctcggtttcc gtccaggatggcatcctgctggccacgggcctccacgtgcacaggagcagcgctcacagc gcgggagtcggctccatcttcgacagagtccttacagagttggtgtccaagatgaaagac atgcagatggataagtcagagctggggtgcctacgggccatcgtgctgtttaacccagat gccaagggtttatccaacccctctgaggtggagactcttcgagagaaggtttatgccacc ctggaggcctataccaagcagaagtatccggaacagccaggcaggtttgccaagcttctg ctgcgtctccctgctctgcgctccatcggcttgaaatgcctggaacacctcttcttcttc aagctcattggagacactcccatcgacagcttcctcatggagatgttggagaccccactg cagatcacctga

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