Mus musculus (house mouse): 20589
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Entry
20589 CDS
T01002
Symbol
Ighmbp2, AEP, Catf1, RIPE3b1, Smbp-2, Smbp2, Smubp2, nmd, sma
Name
(RefSeq) immunoglobulin mu DNA binding protein 2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmu03009
]
20589 (Ighmbp2)
03012 Translation factors [BR:
mmu03012
]
20589 (Ighmbp2)
Enzymes [BR:
mmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
20589 (Ighmbp2)
5.6.2.5 RNA 5'-3' helicase
20589 (Ighmbp2)
Ribosome biogenesis [BR:
mmu03009
]
Eukaryotic type
Other ribosome biogenesis factors
20589 (Ighmbp2)
Translation factors [BR:
mmu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
20589 (Ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
Viral_helicase1
DEAD
nSTAND3
AAA_16
AAA_22
Helicase_RecD
IstB_IS21
UvrD-helicase
SLFN-g3_helicase
AAA_25
PhoH
Flavi_DEAD
AAA
DnaB_C
Zot
ABC_tran
UvrD_C_2
NTPase_1
AAA_23
DAP3
Motif
Other DBs
NCBI-GeneID:
20589
NCBI-ProteinID:
NP_033238
MGI:
99954
Ensembl:
ENSMUSG00000024831
UniProt:
A0A0B4J1E3
LinkDB
All DBs
Position
19:complement(3309076..3333011)
Genome browser
AA seq
993 aa
AA seq
DB search
MASSTVESFVAQQLQLLELERDAEVEERRSWQEHSSLRELQSRGVCLLKLQVSSQRTGLY
GQRLVTFEPRKFGPAVVLPSNSFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDES
HDLQLNLDRENTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTPSPAME
IPPLSFYNTTLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCC
APSNIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDID
QVFGKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPL
KLLPEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRS
LMERLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTSHPSVAGHLLKDLPGVTDT
EETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPY
NLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAV
TRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEVRTAFEYLDDIVPENYTHEGSQGHSR
VPKPKCPSTSIRKPASDQESGQETRAAPRHGRRKPSEKPPGSHVQSQHSSSANGSDRTGG
PDRTEHFRATIEEFVASKESQLEFPTSLSSHDRLRVHQLAEEFGLRHDSTGEGKARHITV
SRRSPASSGSVAPQPSSPPSPAQAEPEPRAEEPVTVVQAHCPVQLDLKALHLERLQRQQS
SQAQTAKGQPGGDSRPQKASQKKKKKEPKGPVMALPCEEDFDALVSAVVKADNTCSFSKC
SASTTTLGQFCMHCSHRYCLSHHLPEIHGCGEKARAHARQRISREGVLYAGSGTKDRALD
PAKRAQLQRRLDKKLGELSSQRTSRKKEKERGT
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtccaccgtggagagtttcgtggcccagcagctacagctgctggagctggag
cgggacgccgaggtggaggagcgcaggtcctggcaggaacacagttctctgagagagctt
cagagccgaggggtgtgcttgctgaagcttcaggtatccagccagcgcacagggctgtat
gggcagcggctggtcacctttgagcccaggaagtttggacctgcagtggtgcttcctagc
aacagcttcacctctggtgatattgtgggtctgtatgatactaatgaaaacagtcaactg
gccactggggtcctgacccgaatcacccaaaaatcagtcacagtggcttttgatgagtcc
catgatctccagctgaacctggacagagagaatacctacagactgctgaagcttgccaac
gatgtcacctacaaacgcctgaaaaaagcactgatgacactgaagaagtaccactctggg
ccagcatcctccctcatagacatcctgttgggcagctccaccccaagtcctgccatggaa
atacccccactctctttctacaacacaactctggacctttcccagaaagaagctgtgtcc
tttgcactggcccagaaagaacttgccatcatccatgggcctcctggcactgggaaaacc
acaactgtggtggaaataatccttcaagctgtgaagcaaggcttaaaggtcctgtgctgt
gctccctccaacatcgctgtggacaacctggtggagcgtctggctctgtgcaagaagcgg
attctgcgcctgggtcaccccgcccgcctcctggagtccgttcagcaccactcactggat
gcagtgctagcacgcagtgacaacgcccagattgttgctgacatcagaagggacatagac
caggtctttggcaagaacaaaaagacgcaggataagagagagaaaggtaattttcgaagt
gaaattaagctgctaaggaaggaactgaaggagagggaagaagcagccatagttcagagc
ctcactgcggcagatgtggttctagccaccaacacaggtgcatcgtctgatggccctctg
aagctgctgcctgaggactactttgatgtggtggtggtggacgaatgtgcccaggcccta
gaagccagctgctggatccccctgctgaaggccccaaagtgcatcctagctggggaccac
agacagctgccacccaccaccgtctctcacagggcggcactggctgggctgtcccgcagc
ctgatggagcgtctggcagagaagcatggtgctggtgtggtgaggatgctgacggtacag
taccgaatgcaccaggccatcatgtgctgggcctcggaggccatgtaccacgggcagctt
acttcccatccctctgtggcaggacacctcctgaaggacctcccaggcgtgactgacaca
gaggagacacgtgtcccgctgctgctcatagacaccgctggctgtgggcttctggagctg
gaggaggaggacagccagtccaagggaaatccgggcgaagttcgcctcgtcactttgcac
atccaggctctggtggatgctggggtccaggcaggtgacattgccgtcatcgcaccctac
aaccttcaggtggatctgctcagacagagcctctccaacaagcaccctgagctggagatt
aagtctgttgatggctttcaaggccgagagaaagaggctgtgctcctgacctttgtcagg
tccaataggaaaggtgaagttggttttctggctgaggacaggcggattaatgttgctgtt
acccgtgctcggcggcacgtggcagtcatctgtgattcccacactgtcaacaaccatgct
tttttgaagaccttggtggattatttcacagagcatggggaggtacgcacagcctttgaa
tacctggatgacatcgtccctgagaactacacccatgagggttcccagggccacagccgt
gtccccaaacccaagtgccccagcacctccatcaggaagcctgccagtgatcaggagagt
ggccaggagaccagagcagcccctagacatggccgcaggaagccaagcgagaagcccccg
ggctctcacgtccagtcccagcacagctccagtgcaaatggctctgacagaactggaggc
ccagaccggacagagcactttagggctacgattgaggagtttgtggctagcaaggagtcc
cagttggagtttcccacatccctgagttcccatgacaggctgcgagtccaccagttagct
gaggagttcgggctgaggcacgacagcaccggggaggggaaggctcggcacatcacagtg
agcaggaggagccctgccagctctggcagtgtagccccacagccttcctcaccgcccagc
cctgcacaggctgagcctgagcctcgggcagaggagcccgtcaccgtcgtgcaggcacat
tgccctgtacagctggatctgaaggcactgcatctggagaggctgcagcggcagcaaagc
tcccaggctcagacagccaagggtcagccaggtggggactcgaggccacagaaggcttca
cagaagaaaaagaaaaaagaaccaaaaggtccagttatggctctgccctgtgaggaggac
ttcgacgccctggtgtctgctgtggtgaaggctgacaacacctgtagcttctccaagtgc
tcggccagcaccaccactctgggccagttctgcatgcactgtagccaccgctactgcctc
agccaccatctgcctgaaatccacggctgtggagaaaaggctcgtgcccatgcccgccag
aggattagccgggaaggagtgctgtatgcaggcagtgggaccaaggacagggccctggac
ccggccaagagggcccagctgcagaggaggctggacaagaagctgggcgagctcagcagc
cagaggacaagcaggaagaaggagaaggagagggggacatga
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integrated database retrieval system
