Mus musculus (house mouse): 623474
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Entry
623474 CDS
T01002
Symbol
Rad54b, E130016E03Rik
Name
(RefSeq) RAD54 homolog B (S. cerevisiae)
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
623474 (Rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmu03400
]
623474 (Rad54b)
DNA repair and recombination proteins [BR:
mmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
623474 (Rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Flavi_DEAD
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
623474
NCBI-ProteinID:
NP_001034645
MGI:
3605986
Ensembl:
ENSMUSG00000078773
UniProt:
Q6PFE3
LinkDB
All DBs
Position
4:11558930..11615806
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AA seq
886 aa
AA seq
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MRRSAAPSQVQGKSFKKTRFIPPGRSNADVSKEITKMSPDPKLFQGAEQSQNDPGVCSSN
PCPSEGIPREVGDGTRVDPLPPVHSASKEITESKAQEEEASSLLKYFSVVWCKASKKKHK
KWEGDAILIVRGRSFTLKDLEGKDIGRGIGYKFKDLENVEEGQTLIIGGKEIEILGTISS
DDFNSGKCFQHGSGSPAVPSSQAARKCFSNPFKSVCQSTQAQGKRWNDCRPRHNPCTPNA
LVMPRPDENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGA
ILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER
IKIFTVDQDHKVEEFINSTFHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIK
TTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREP
SSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKL
LRSQSVRFCLQGLLENSAHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQG
LLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKR
HGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDW
NPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHI
QFSVEELKNLFTLHESSHCVTHDLLDCECTGEKGHTEDASEGPVASRQCQFGPQKSDALR
PLSMSQLKQWKHFSGDHLNLPDPFLERIRENVSFFFQNITNQAPAV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatctgcagcaccaagtcaggtgcagggaaagtcctttaaaaaaacaagattc
atacctccaggaagaagtaatgcagatgtgagtaaggagatcacaaagatgagtccagat
ccaaaactgtttcagggtgctgaacagtcacaaaatgatccaggtgtatgcagttcaaat
ccttgccccagtgagggaatccctagggaagtgggtgatgggactagagtagatccactt
cctccagttcattcggcctctaaagaaatcacagagtccaaggcacaagaagaggaagct
agcagcttgcttaaatatttcagtgttgtttggtgtaaagcttcaaagaaaaaacacaaa
aagtgggaaggcgatgctattcttattgtaagaggaaggtccttcacattgaaagatttg
gaaggaaaagatattggaagaggcattggatacaaattcaaggaccttgagaatgtagaa
gagggccaaacattgataattggtgggaaagaaatagaaatcctggggacaatctcttct
gatgacttcaacagtggcaagtgttttcagcacggaagtggaagtcctgctgtcccaagt
tctcaggctgccaggaaatgcttttctaaccctttcaaaagtgtgtgtcagtcaacgcaa
gcacagggaaaaagatggaatgactgcagaccgcgccataacccgtgcacaccaaatgcc
cttgttatgccgcgcccagacgagaatcaccagcggatgtttaataggcactgctctcct
attgtggatgtcgtgatagaccctcaccttgtacaccacctccgaccacatcagaaagac
ggaatcatcttcctctatgagtgtgtgatgggaatgagagcagttggcaaatgtggcgct
attcttgctgatgaaatgggcttagggaaaacgttgcagtgtatctcgctcatctggacc
ctacagtgtcaggggccctatggcggcaagccagtaataaagaagacactcattgttacc
cctggaagcctggtgaataattggaggaaagaatttcaaaaatggctgggaagtgaaagg
atcaagatattcaccgttgatcaggaccataaagtcgaggagtttatcaattctacattt
cattcagttcttatcatcagttatgaaatgttacttcgttccctagatcaaattaagact
atcccatttggccttctgatctgtgatgagggacaccgtttgaagaacagcagcatcaag
acaacgacggccctttctagcctctcctgtgagaagacagtaattctcactggtacccca
gttcagaatgatttgcaagagttttttgcattagttgattttgttaatccaggaatatta
gggtctctgtcgtcttacaggaaaatatatgaagaacccatcattatatcaagagagcct
tcttcttctaaggaagagagagagttaggggagagaagagcaactgagctcacgcgcctc
actggacgttttatccttagaagaactcaggaagtcatcaataaatatctcccgcctaag
atagagaatgtagtcttttgccgaccaggagcattgcagattgaactttaccgaaagctg
ctgcgctctcagtctgtgaggttctgtttgcaaggactattggaaaatagtgctcacctc
atctgcataggggccctaaagaagctgtgcaaccacccttgcctcttgttcagctctgtg
aagggcaaagaatttagctcaagttgtgaggaaaatgaagaaagaaatctatgccaaggc
ttgctgtctgtgttccctgctggctacaaccctctgcagttctctgaggaagagtcagga
aaactacaggtgttagtcaagctcctggcagtgatccatgaacttcgtcccactgagaaa
gtgattttggtatccaactacagacaaaccttgaatgttctagaagaagtatgtaagcgt
catggatatgcttgtgcaagacttgatggccaaacaccagtctctcaaaggcagcacatt
gttgatagtttcaatagtaaatactctactgattttatttttttattaagttcaaaagct
ggtggtgtgggacttaatctcattggaggatctcacttaattctctatgatatcgattgg
aacccagctactgatatccaggccatgtctagagtatggagagatggtcagaagcatcct
gtacatatttacagactcctgactacaggtacaatagaggaaaagatctatcaaaggcag
atcagtaagcaaggcctttctggggcagtggtagacctaaccagatcatctgaacatatc
cagttttcagtggaagagcttaaaaacttgttcacactacatgaaagttcacattgtgtc
actcatgacctgcttgactgtgagtgcacaggggaaaaaggtcacaccgaggatgcgtcc
gaaggccccgtcgcctcccgacagtgtcagttcggccctcagaagtctgacgccttgaga
cctctgtccatgtcacagctgaagcagtggaaacatttttctggagaccatttaaatctt
ccagatccatttctcgaaagaatacgggaaaatgtgtcgttctttttccagaatataacc
aaccaagctcctgccgtctaa
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