Mus musculus (mouse): 71586
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Entry
71586 CDS
T01002
Gene name
Ifih1, 9130009C22Rik, Heli, Helicard, Hlcd, MDA, MDA-, MDA5, RLR-2
Definition
(RefSeq) interferon induced with helicase C domain 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
3.6.4.13
]
Organism
mmu
Mus musculus (mouse)
Pathway
mmu04622
RIG-I-like receptor signaling pathway
mmu05161
Hepatitis B
mmu05162
Measles
mmu05164
Influenza A
mmu05168
Herpes simplex virus 1 infection
mmu05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
71586 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
71586 (Ifih1)
05171 Coronavirus disease - COVID-19
71586 (Ifih1)
05164 Influenza A
71586 (Ifih1)
05162 Measles
71586 (Ifih1)
05168 Herpes simplex virus 1 infection
71586 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmu04054
]
71586 (Ifih1)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
71586 (Ifih1)
Pattern recognition receptors [BR:
mmu04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
71586 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
Helicase_C
ResIII
DEAD
CARD
SWI2_SNF2
AAA_19
DUF3638
AAA_22
Motif
Other DBs
NCBI-GeneID:
71586
NCBI-ProteinID:
NP_082111
MGI:
1918836
Ensembl:
ENSMUSG00000026896
Vega:
OTTMUSG00000012871
UniProt:
Q8R5F7
Q3TGP5
D2CGM4
LinkDB
All DBs
Structure
PDB:
3TS9
6G19
6GKM
6G1X
6G1S
6H61
6GKH
6GJZ
6H66
Thumbnails
Position
2; 2 C1.3
AA seq
1025 aa
AA seq
DB search
MSIVCSAEDSFRNLILFFRPRLKMYIQVEPVLDHLIFLSAETKEQILKKINTCGNTSAAE
LLLSTLEQGQWPLGWTQMFVEALEHSGNPLAARYVKPTLTDLPSPSSETAHDECLHLLTL
LQPTLVDKLLINDVLDTCFEKGLLTVEDRNRISAAGNSGNESGVRELLRRIVQKENWFST
FLDVLRQTGNDALFQELTGGGCPEDNTDLANSSHRDGPAANECLLPAVDESSLETEAWNV
DDILPEASCTDSSVTTESDTSLAEGSVSCFDESLGHNSNMGRDSGTMGSDSDESVIQTKR
VSPEPELQLRPYQMEVAQPALDGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASESGKV
IVLVNKVMLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILEN
SLLNLESGDDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLRNNDLKKQNKPAI
PLPQILGLTASPGVGAAKKQSEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKF
VIADDTRENPFKEKLLEIMASIQTYCQKSPMSDFGTQHYEQWAIQMEKKAAKDGNRKDRV
CAEHLRKYNEALQINDTIRMIDAYSHLETFYTDEKEKKFAVLNDSDKSDDEASSCNDQLK
GDVKKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSR
GIIFTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFRT
GEINLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGV
TEREIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYNDNP
SLITLLCKNCSMLVCSGENIHVIEKMHHVNMTPEFKGLYIVRENKALQKKFADYQTNGEI
ICKCGQAWGTMMVHKGLDLPCLKIRNFVVNFKNNSPKKQYKKWVELPIRFPDLDYSEYCL
YSDED
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgtctgttctgcagaggacagcttcaggaatctcatcttattcttcaggccc
aggctgaaaatgtacattcaggtggagccagtgctggaccacctcatctttctgtctgca
gaaaccaaagagcagattcttaaaaagatcaacacctgtggtaacaccagcgcggcagaa
ctgctgctgagcaccttggagcagggacaatggcctctgggatggacgcagatgttcgtg
gaggccctagagcacagtggcaatcccctagccgcgcgctatgtcaaacccacactcact
gatctgccctctccttcctctgagactgcccatgacgagtgtctccacttgctgaccctc
ctccagcccactttggtggacaaacttctgattaacgatgtcttggacacttgcttcgag
aagggactattgacagtcgaagacagaaatcggatttctgctgcaggaaacagcgggaat
gagtcaggtgtaagagagctgctgagaaggattgtgcagaaggaaaactggttttctacc
ttcctggatgttctgcgccaaactggaaatgatgcactattccaagaactaacaggtgga
ggctgcccagaagacaacacagacttggctaactcgtctcacagagatgggcctgcagct
aatgagtgtcttctgcctgctgtcgatgagtcaagtctggagacagaggcctggaacgta
gacgacatattaccagaggcttcttgtacagattcgtctgtgaccacagaatcagacaca
agtttggcagaaggaagtgtcagctgcttcgatgaaagtcttggacataacagcaacatg
ggcagggattcaggcaccatgggaagtgattcagatgaaagtgtcatccagacaaaaaga
gtatcccccgagccagaactgcagctcaggccttaccaaatggaagtggcccaaccagct
ctagatgggaagaatattattatctgcctccccacggggagtgggaaaaccagagtggct
gtttacatcaccaaagatcacttagacaagaagaagcaggcatctgaatccgggaaggtt
atcgttcttgtcaataaggtaatgttagcagaacaacttttccgaaaagagttcaaccca
tatttgaagaaatggtatcgaattattggattaagtggcgatacccagctgaaaatatca
tttccagaagttgtcaaatcttacgatgttattatcagcactgctcaaatccttgaaaac
tccctcttaaatctggagagtggagacgatgacggtgtgcagctgtcagacttctctctc
attatcattgatgagtgccatcacaccaacaaggaggcagtctataacaacatcatgaga
cgatatttgaagcagaagctgagaaacaatgacctcaagaaacaaaacaaaccagccatt
cccctgccgcagatactaggactgacagcttcacctggtgttggagcagccaaaaagcag
tctgaggctgaaaaacatattttaaatatatgtgccaatcttgatgcctttaccattaaa
acagtgaaagagaatcttggtcaactcaaacaccaaataaaggaaccatgcaagaaattt
gtgattgctgatgacaccagagaaaatccatttaaagagaaacttctagaaattatggca
agcattcagacttactgccaaaaaagtccaatgtcagattttggaacccaacattatgag
cagtgggccattcaaatggagaaaaaagctgctaaagacggaaatcgcaaagatcgcgtc
tgtgcagaacatttgaggaagtacaacgaagccctacaaatcaacgacacgatccgaatg
attgatgcatatagccacctggagacattctacactgatgagaaagaaaagaagttcgca
gtcctcaatgacagcgacaagagtgatgacgaggccagcagttgcaatgaccaacttaag
ggcgatgtaaagaaatctttgaaactggacgaaacggatgaatttctcatgaatttgttc
tttgataacaagaaaatgttgaaaaaactagctgaaaacccaaaatacgagaatgaaaaa
ctcattaaattaagaaacacgatactggaacaattcacaaggtctgaggagtcctcccga
ggaattatttttacaaaaacacgacagagcacctacgcactttcccagtggatcatggaa
aatgcaaagtttgcggaagttggagtcaaagcgcatcacctgattggcgcggggcacagc
agtgaagtcaagcccatgactcagactgaacaaaaagaagtcattagtaaatttcgcact
ggcgaaataaatctgcttatcgctacgacggtggcagaggaaggcctggatatcaaagag
tgcaatattgttattcgttatggccttgtcacgaacgagatagccatggtccaggcccgg
ggtcgagccagagctgatgaaagcacgtatgtcctggtcaccagcagtggctcaggagtt
accgaacgggagattgttaatgatttccgagagaagatgatgtataaagctattaaccgt
gttcaaaacatgaaaccagaggagtatgcacataagattttggaattgcaggtgcaaagt
atcctggaaaagaaaatgaaagtcaaaagaagcattgcaaagcaatacaacgacaatcca
tcgttaataacacttctctgcaaaaattgtagcatgctggtctgctcgggagaaaacatc
catgtcattgagaagatgcatcatgtcaatatgacaccagaattcaagggactctacatt
gtaagagaaaacaaagcactgcaaaagaaatttgctgattatcagaccaatggagagatt
atctgcaagtgtggccaggcttggggaacaatgatggtgcacaaaggtttagatttgcct
tgtcttaaaataaggaattttgtagtcaatttcaaaaataactcaccgaagaaacagtac
aagaagtgggtggaattgcctatcagatttcctgatcttgactactcagaatactgcttg
tatagtgatgaagattag
DBGET
integrated database retrieval system
