Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_0864
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Entry
MYCMA_0864 CDS
T02177
Name
(GenBank) DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYCMA_0864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_0864
Enzymes [BR:
mmv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MYCMA_0864
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYCMA_0864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFN63017
LinkDB
All DBs
Position
complement(3198279..3199076)
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AA seq
265 aa
AA seq
DB search
MPEGHTLHRLARLHQRRFAGAPVSVSSPQGRFTEGAAAVNGRTFIKAHAWGKHLFHDYGP
VGVVHVHLGLYGAFTELPVPMGLPVGQVRMRIEGSEFGTDLRGATACELIDAPQVEAILA
RLGPDPLRPGSDPASAFERIAKSHRPIGALLMDQKIIAGVGNVYRSEVLFRRRIDPYREG
SRLDPEQLTALWGDLMGLMRVGLRVGKIVTVDPEHDCGDPSYAPDRPRTYVYRRAGAPCR
VCGTPILTAEMDARNLFWCPSCQIR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagggccacaccctgcaccggctggcccggttgcaccagcgccggttcgccggt
gcgccggtgtcggtgagcagcccgcagggacggttcaccgaaggcgcggccgcggtcaat
ggacgtacctttatcaaggcgcacgcctggggtaagcatctgtttcacgactatggccct
gtcggcgtggtgcatgtgcaccttgggctgtatggcgcgttcacggaattacctgtgccg
atgggcctgcccgttggtcaggtgcggatgcgtatcgaagggtccgagttcggtaccgac
ctgcgtggcgcgacggcatgtgagctcatcgacgccccgcaagtcgaggccatcctggcc
cgcctgggtcctgacccgctgcgtcccgggtcggatccggcatccgcgttcgagcggatc
gccaagtcgcacaggccaatcggcgcactactgatggatcagaagatcatcgccggtgtg
ggaaatgtgtatcgcagcgaggtgctgtttcgtaggcggatcgatccgtaccgcgagggg
agccgcctcgatccggaacagctcaccgcgctctggggcgatctgatgggtctgatgcgc
gtcgggctgcgggtcggcaagatcgtcaccgtcgaccctgagcacgactgcggcgacccg
tcctatgctccggaccgcccgcgcacctacgtgtaccggcgtgcaggtgcgccgtgccgg
gtgtgcggaacgccgatcctcaccgcggaaatggacgcgcgaaacctcttctggtgtccc
tcatgtcaaattcgctga
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