Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_1241
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Entry
MYCMA_1241 CDS
T02177
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYCMA_1241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_1241
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYCMA_1241
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MYCMA_1241
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_5
AAA_19
DUF87
UB2H
Helicase_RecD
UPF0730
UvrD-helicase
HEM4
AAA_7
AIG1
Motif
Other DBs
NCBI-ProteinID:
AFN63385
LinkDB
All DBs
Position
complement(2594985..2597144)
Genome browser
AA seq
719 aa
AA seq
DB search
MAFATEHPIVAHSEYRPVTDILRTEGRFEVVSQYEPAGDQPGAIAELERRVRAGEKDVVL
LGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSNLLSRRDVVVVASVSCIYGLGTPQSYLDR
SVQLDVGLEVPRDALLRLLVDMQYNRNDMAFTRGTFRVRGDTVEIIPSYEELAVRIEFFG
DEVEALYYLHPLTGDVVRQTNSLRIFPATHYVAGPERMGKALEGIEQELEERLSELEGQG
KLLEAQRLRMRTNYDIEMMRNVGFCSGIENYSRHIDGRGAGTPPATLLDYFPDDFLLVID
ESHVTVPQIGAMYEGDMSRKRNLVDFGFRLPSAVDNRPLTWEEFADRIGQTVYLSATPGN
YERSAAGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIASIRQRTEADERVLVTTLTKKM
AEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSSRSLIQTIGRAARNVSGEVHMYADTMTDSMKEAIEETDRRRAKQIAY
NQANGIDPQPLRKKIADILDQVYREAEDTEEVAVGGSGRNSSRGRRAQGEPGRAVSAGVF
EGRDTKSMPRAELADLIKDMTEQMMTAARDLQFELAARFRDEIADLKKELRGMDAAGLK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgcaacagaacaccccatcgttgcgcattccgagtatcgcccggtcacggat
atcttgcgtaccgaggggcggttcgaggtcgtcagtcagtacgaacccgccggcgaccag
cccggtgctatcgccgagctcgaacgcagggtccgtgcgggggagaaggacgtggtactc
ctcggtgccaccggtaccggtaagtcggccacgacggcctggctcatcgagcgcttgcaa
cggccgacgctcgtcatggcacccaacaagaccctcgcggcacagttggccaacgagctc
cgggaaatgttgccgcacaacgccgtcgagtacttcgtttcgtactatgactactaccag
ccggaagcgtatatcgcgcaaaccgatacctacatcgaaaaagacagctccatcaacgat
gacgtggaacgtctgcggcactcggcgacatccaacttgctgtcccgccgggatgtcgtg
gtggtggcctcggtctcatgcatctacggattgggtactccgcagtcgtacctggatcgt
tcggtgcagttggacgtggggctggaggtgcctcgcgatgcgctgctgcggctgctggtc
gacatgcagtacaaccgcaatgacatggccttcacccgcggcaccttccgggtacgcgga
gacaccgtcgagatcatcccgtcctacgaagagctggccgttcgcatcgaattcttcggt
gacgaggtagaggcactctattatctgcatccgctcacgggagacgttgtgcggcagact
aattcgctgagaatttttcccgccacccattacgtggccgggccggagcgcatggggaag
gcgctggagggtatcgagcaggagctcgaggagcgtctgtccgaattggaggggcaaggc
aagctgctggaggcgcagcgcctgcggatgcggaccaactacgacatcgagatgatgcgc
aatgtcggcttctgctcgggtatcgaaaactattcgcggcatatcgacggacgtggcgcc
ggtacgccgcccgccaccttgctggactacttcccggatgatttcctgctggtcatcgat
gaatctcatgtgaccgttccgcagatcggtgccatgtatgagggcgacatgtcgcgtaaa
cggaacctggtggacttcggtttccggctcccatccgccgtcgacaatcgtcctctcacc
tgggaagagttcgccgaccgtatcggccagacggtgtatctgtccgcgacccccggcaac
tatgagcgcagtgcggcgggcggcgagttcgtggaacaggtcatccggccgaccgggctg
gtggatcccaaggtggtggtcaaacccaccaaggggcagatcgacgatctcattgcatcg
atccggcagcgcaccgaggccgacgaacgcgtgctggtgaccacgctgacgaaaaagatg
gcggaggacctcaccgactaccttctggaaatgggtatccgggtgcgttatctgcactcc
gaggtggacacgctgcggcgagtcgagctgttgcgccagctcaggcttggcgagtacgac
gtcctggtgggtatcaacctgctgcgggaaggccttgacctgcccgaagtgtcgttggtt
gcgattctggacgccgacaaggaagggttcttgcggtccagtagaagcctgatccagacc
atcggtcgtgccgcgcgcaacgtctccggtgaggtgcacatgtatgccgacaccatgacc
gactccatgaaggaggcgatcgaggagacggatcgtcgacgtgccaagcagatcgcctat
aaccaggccaatggaatcgacccacaacccttgcgcaagaagatcgccgacatcctcgac
caggtgtaccgggaggccgaggacaccgaggaagtggcggtcggtggatccggtcgtaac
tccagccggggccggcgggctcagggcgagcccggtcgcgcggtcagcgccggggtcttc
gaaggtcgtgacaccaagagcatgccgcgtgcggagctggccgatctgatcaaggacatg
accgagcagatgatgacggcggcacgcgatctgcagttcgagttggcggcccgattccgc
gacgagatcgccgatctcaaaaaggaattgcgcggcatggatgccgcaggcttgaagtag
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integrated database retrieval system
