Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_1706
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Entry
MYCMA_1706 CDS
T02177
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCMA_1706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmv03019
]
MYCMA_1706
03016 Transfer RNA biogenesis [BR:
mmv03016
]
MYCMA_1706
Enzymes [BR:
mmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MYCMA_1706
Messenger RNA biogenesis [BR:
mmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MYCMA_1706
Transfer RNA biogenesis [BR:
mmv03016
]
Prokaryotic type
tRNA degradation factors
MYCMA_1706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
KH_5
Motif
Other DBs
NCBI-ProteinID:
AFN63843
LinkDB
All DBs
Position
1789248..1791515
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AA seq
755 aa
AA seq
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MSVTEIEEGIFESTATIDNGSFGTRTIRFETGRLALQAAGSVVAYLDDETMLLSTTAASK
TPKDHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR
NEIQVVVTVLSLNPDDLYDVLAINAASASTQLAGLPFSGPVGGVRVALIEGQWVAFPTVE
QLEKAVFDMVVAGRKVGTAGDSDVAIMMVEAEATDNVIALIDGGAGAPTETVVAEGLEAA
KPFIAALCTAQEELAGSAAKPTGEFPLFPDYQDDVYAAVAAVATEPLSQALSIAGKAERD
EKTDEIKVDVLGRLQEGFDGREKEIGAAFRSLTKKLVRQRILKDQFRIDGRGVTDIRALS
AEVAVIPRAHGSALFERGETQIMGVTTLDMIKMAQQVDSLGPETTKRYMHHYNFPPFSTG
ETGRVGSPKRREIGHGALAERALIPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTL
ALLNAGVPLKAPVAGIAMGLVSDDVELADGTAERRFVALTDILGAEDAFGDMDFKVAGTK
DFVTALQLDTKLDGIPSQVLAAALSQAKDARTTILEVMAEAIDAPDEMSPYAPRITTIKV
PVDKIGEVIGPKGKMINSITEETGANISIEDDGTVFVGAADGASAQAAIDKINAIANPQL
PKIGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVKVGDKIQVEIA
DIDNRGKISLIPVGEEDAAEAPAPAEAQPADAVTQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacagagattgaagaaggcatcttcgagtccaccgcgaccatcgacaacggg
agcttcggcacccgcaccatccggttcgagacggggcgcctggccctgcaggccgccggt
tcggtcgtcgcctacttggacgacgagacgatgctgctgtcgaccacggccgccagcaag
accccgaaggatcacttcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtac
gccgcgggccgcatccccggctcgttcttccgtcgtgagggccgtccctccaccgacgcc
attttgacctgccgtctgatcgaccggccgctgcgcccgtcgttcgtgagcgggctgcgt
aacgagatccaggtcgtggtgacggtgctgagcctgaaccccgacgatctgtacgacgtg
ctggccatcaatgcggcgtccgcctccactcagcttgccggactcccgttctcgggcccg
gttggcggagtgcgagtcgccctgatcgagggccagtgggtggcgttcccgaccgtcgag
cagctggagaaggctgtgttcgacatggtggtcgcgggccgcaaagtaggcaccgccggt
gattccgatgtcgccatcatgatggtcgaggccgaggccactgacaatgtcatcgcattg
atcgacggtggcgccggtgcgcccaccgaaaccgttgtcgccgaggggctcgaggcggcc
aagccgtttattgctgccctgtgcaccgcgcaggaggagctggccggcagcgccgccaag
cccaccggcgagtttccgctgttcccggactaccaggacgacgtctacgccgccgtcgcg
gccgtggccaccgagccgctgtcgcaggcgctctcgatcgcaggcaaggccgagcgcgat
gagaagaccgacgagatcaaggtcgacgtgctgggccggctccaggagggcttcgacggc
cgtgagaaggaaatcggcgccgcgttccgctcgctcaccaagaagcttgtgcgccagcgc
atcctgaaggatcagttccgcatcgatggccgcggcgtcaccgacattcgcgccctgtcg
gccgaggtcgccgtgatcccgcgtgcccacggcagtgccctgttcgagcgtggcgagacg
cagatcatgggtgtgaccaccctggacatgatcaagatggctcagcaggtcgattcgctc
ggacccgagaccaccaagcgctacatgcaccactacaacttcccgccgttctccaccggt
gagaccggccgcgtcggttcgccgaagcgtcgcgaaatcggccacggcgccctcgccgag
cgcgcgctcatcccggtgctcccgagcgttgaggagttcccctacgcgatccgtcaggtc
tcggaggcgctgggctccaacggctctacctcgatgggttcggtgtgtgcttccaccctg
gcgctgttgaacgccggcgtgccgctgaaggcgcccgtcgccggtatcgccatgggtctg
gtgtccgatgacgtcgaacttgcagacggcaccgccgagcgtcgcttcgtcgcgctcacc
gatatcctgggtgccgaggatgccttcggcgacatggacttcaaggtcgccggcaccaag
gatttcgtcaccgccttgcagctggacaccaagctcgacggcatcccgtcgcaggtgctg
gccgccgcattgtcgcaggccaaagacgcccgcaccaccatcctcgaggtgatggccgag
gcgatcgacgctcccgacgagatgagcccgtacgcgccgcgtatcaccaccatcaaggtg
ccggtcgacaagatcggtgaggtgatcgggcccaagggcaagatgatcaactccatcacc
gaggagaccggcgcgaacatctccatcgaggatgacggcaccgtgttcgtcggtgctgcc
gacggtgcctcggcgcaggccgcgatcgacaagatcaatgccatcgccaacccgcagttg
cccaagatcggcgagcgtttcctcggaacggtggtgaagaccactgacttcggagctttc
gtttccctcttgcccgggcgcgacggcctggtgcacatcagcaagctcggtaagggcaag
cggattgccaaggttgaagacgtggtcaaggtcggcgacaagatccaggtggagatcgcc
gatatcgacaaccgcggcaagatctcgctgatcccggtcggcgaagaggatgccgcggaa
gctcccgcacccgcggaggcccagccggctgatgccgtcacccagtaa
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