Mycoplasma mycoides subsp. mycoides SC PG1: MSC_0336
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Entry
MSC_0336 CDS
T00161
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmy
Mycoplasma mycoides subsp. mycoides SC PG1
Brite
KEGG Orthology (KO) [BR:
mmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmy03016
]
MSC_0336 (truB)
Enzymes [BR:
mmy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSC_0336 (truB)
Transfer RNA biogenesis [BR:
mmy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSC_0336 (truB)
Prokaryotic type
MSC_0336 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6883
Motif
Other DBs
NCBI-ProteinID:
CAE76976
UniProt:
Q6MTR0
LinkDB
All DBs
Position
385427..386305
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AA seq
292 aa
AA seq
DB search
MQKSGIFILNKPSNISTYQLINQVKKKLNIKKVGHCGTLDLLATGVVICLVNNATKISDY
LLNANKAYQVKIKLFTLTDSFDAEGNIIQTQTPFNISLDQINKVISKYNNYTYNQYPPIY
SSIKVDGKKLYEYALTNQNVEIKSRKVTIYKTSLLSYDQKNYEIFLDVKCSKGTYIRSLA
VDICKDLNTIGYVVYLNRTLSGNFKLENAIDLNNISWDHLISINDAIRTNDFKVVKYQNS
LEIIQGKKIILNDINDDLVFISDDQNNILAVYQKYDNNIFKIKRGGLNNDIY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatcaggaatttttattttaaataaacctagtaatatttcaacctatcaatta
attaatcaagttaaaaagaaattaaatattaaaaaagttggtcattgtggtactttagat
ttactagcaactggagttgtaatttgtttagtaaataatgctactaaaattagtgattat
ttattaaacgctaataaagcttatcaagtaaaaattaaattatttacactaactgatagt
tttgatgctgaaggaaatattattcaaacccaaactccttttaatattagtttagatcaa
atcaataaagtaattagtaaatataataactatacttataaccaatacccaccaatttat
tcatctataaaagttgatggtaaaaaattatatgagtatgctttaactaatcaaaatgtt
gaaattaaaagtagaaaagtaactatttataaaactagtttattaagttatgatcaaaaa
aattatgagatttttttagatgttaagtgtagtaaaggaacatatattagaagtttagct
gttgatatatgtaaagatttaaatacaataggatatgtagtttatttaaatagaacactt
tctggtaattttaaactagaaaatgctattgatttaaataatattagttgagatcattta
atctcaataaatgatgcaattagaactaatgattttaaagtagttaaatatcaaaatagt
ttagaaataatacaaggtaaaaaaattattttaaatgatattaatgatgatttagttttt
attagtgatgatcaaaataatattctagctgtttatcaaaaatatgataataatatcttt
aaaattaaaagaggaggattaaataatgatatatattaa
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