Miniopterus natalensis (Natal long-fingered bat): 107542039
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Entry
107542039 CDS
T05883
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
3.6.4.13
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107542039 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mna03041
]
107542039 (SNRNP200)
Enzymes [BR:
mna01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
107542039 (SNRNP200)
Spliceosome [BR:
mna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107542039 (SNRNP200)
Complex C
U5 SnRNP specific factors
107542039 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
107542039
NCBI-ProteinID:
XP_016074728
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDGQMADVARFCNRYPNIELSYEVVDKDGIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaggcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacccgccgggatgaacccacgggagaggtg
ctatccctggttgggaagctggaaggcacccggatgggagataaggctcaacggaccaaa
ccacagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggaccggcacgac
atcaacaagatgaaggggtacactctgctctcagagggcattgatgagatggtgggcatc
atctataagcccaaaaccaaagagactcgggagacctacgaagtgctgctcagcttcatc
caggctgcccttggggaccagccacgtgatattctgtgtggggcagctgatgaagttctg
gctgtcctaaagaacgaaaagctgcgtgacaaggaaaggagaaaggagattgacctcttg
ctggggcagacagatgataccagataccatgtgctagtgaacttgggcaaaaagatcaca
gactatggcggagataaggaaatccagaatatggatgacaacattgatgagacatacggt
gtgaatgtacagtttgagtctgacgaggaggagggcgatgaagatgtgtatggagaggtt
cgagaagaggcgtcagatgacgacatggaaggggatgaggcagtggtgcgctgcaccctc
tcagctaaccttgtagcctctggtgaactgatgagttctaagaagaaggatttgcaccct
cgggacattgatgcgttttggctgcaacggcagctcagtcgcttctatgatgatgccatt
gtgtcgcaaaagaaggcagatgaagtgttggaaatcttaaagacggccagtgatgaccgg
gagtgtgagaaccagctggtgctcctcctcggtttcaatacttttgattttattaaagtg
ctgcggcagcacaggatgatgattttatactgcaccttgctggccagcgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagctatcaaagttcctt
taccagctccatgaaacggagaaggaggatctgatccgggaggagcggtcccggagggag
cgagtgcggcagtcccgaatggacactgacctggaaaccatggatttggaccagggcggg
gaggcattggctccgaggcaggttctggacttggaggacctggtttttacccaagggagc
cacttcatggccaacaaacgctgtcaacttccagatggatccttccggcgccagcgcaag
ggctatgaagaggtgcatgtgcctgctctgaagcccaagccctttggctcagaggaacaa
ttgcttccagtggagaagctgcccaagtatgcccaggctggattcgagggcttcaagaca
ctgaaccgtatccagagcaagctctaccgggccgccctggagacggacgagaacctgcta
ctgtgcgctcccactggcgccgggaagaccaacgtggccctaatgtgcatgcttcgggag
atcgggaagcacattaacatggacggcactatcaacgtggatgacttcaagatcatctac
atcgctcccatgcgatccttggtgcaggagatggtgggcagctttggaaagcgcctggcc
acgtatggcattactgttgcagaactgactggcgaccaccagctgtgcaaggaggagatc
agtgccactcagatcatcgtctgtacccctgagaagtgggacatcattacccgcaagggt
ggggagcgcacctatactcagcttgtgcggctcatcattctggatgagatccatcttctc
cacgatgacagaggtcctgtcttggaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtcagactcattgggctgagcgccaccctccccaactatgaagat
gtggccacctttctgcgtgttgatcctgccaagggcctcttctacttcgacaatagcttc
cgcccggtgcctctggaacagacgtatgtcggcatcacagagaaaaaagccatcaagcgt
ttccaaatcatgaatgaaatagtctatgagaagatcatggaacatgcaggaaaaaatcag
gtgctggtgtttgtccactcccggaaggagactgggaagacggccagggccatccgggac
atgtgcctggagaaggacactctgggtctgtttctgagagagggctctgcctccacagaa
gtcttgcggacggaggctgagcagtgcaagaacctggagctgaaggatcttctgccctac
ggctttgctattcaccatgcgggcatgaccagagttgacaggacacttgtagaggatctt
tttgctgataaacacattcaggttttagtttccacagcaactctggcttggggtgtgaac
ctccctgcacatacagtcatcatcaaaggcacccaggtttatagtccagagaagggacgc
tggacagaactgggggcactggacattctgcagatgctgggacgagccggaagaccccag
tatgacaccaagggcgaaggcatactcatcacatctcacggggagcttcagtactacctg
tcccttctcaaccagcagcttcccattgagagccagatggtgtcaaagctgcctgacatg
ctcaatgcggaaattgtgctggggaatgtccagaatgcaaaggatgcggtgaactggctg
ggctatgcctacctgtatatccgaatgctccgatctccaaccctctacggcatctctcat
gacgacctcaagggagaccctctgctggaccagcgccgcctggatctggttcatactgct
gccttgatgctggataagaacaacctggtcaagtatgacaagaagacaggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaatgatacagtacagacc
tacaatcagctgctgaagcccactctgagcgagattgagctcttcagagtcttctcgttg
tcttcagagttcaagaacatcaccgtgagagaggaggagaagctggagctgcagaagctg
ctggaaagggtgcccattcctgtaaaggagagcattgaggaacctagtgcgaagatcaat
gtgcttctccaagccttcatctcacagctgaaattggagggctttgcactgatggctgac
atggtatatgtcacacagtcagcgggccggttgatgcgggccatatttgaaattgtcctg
aaccgaggttgggcacagcttacagacaagaccctgaacctctgcaagatgatcgataaa
cgcatgtggcagtccatgtgtccgttgcgtcagttccggaaactccctgaggaagtagtg
aagaagattgagaagaaaaacttcccctttgagcgcctctatgacctgaatcataatgag
ataggggagctcattcgcatgccgaagatgggcaagaccatccacaaatatgtccacctg
ttccccaaattggagctgtcagtgcacctgcagcccatcacgcgctccaccctgaaagtg
gaactaaccatcacgccagacttccagtgggatgaaaaggtccatggctcgtccgaggcg
ttctggattctggtggaggatgtggacagcgaggtgatactgcaccatgagtacttcctt
ctcaaggccaagtatgctcaggacgagcacctcattaccttctttgtgcctgtctttgaa
ccgctgccccctcagtacttcatccgcgtggtgtctgaccgctggctctcttgtgagacc
cagcttcctgtttccttccgacacctgatcttgccagagaagtatccacctcccactgaa
cttctggacctgcagcccttgcccgtgtctgccttgagaaacagtgccttcgagagcctt
taccaagataaatttcctttcttcaaccccatccagacccaagtgtttaacaccgtgtac
aacagtgacgacaatgtgtttgtgggggcacccaccggcagtgggaagaccatctgtgca
gagttcgccatcctgcgcatgctgctgcagagctcggaggggcgctgtgtctacatcacc
cccatggaggcactggcagagcaggtgtacatggactggtacgagaagttccaggacagg
ctcagcaagaaggtggtgctcttgacaggcgagaccagcacggacctaaagcttctgggc
aaaggcaacatcatcatcagcactcccgagaagtgggacatcctctcccggcgctggaag
cagcgcaagaacgtccagaatatcaacctcttcgtggtggatgaggtccacctcatcggg
ggcgagaatgggcctgtcttggaagtgatctgctcccggatgcgctatatctcctcccag
attgagcggcccattcgcattgtggcacttagctcctcactctcaaatgctaaggatgtg
gcccactggctggggtgcagtgccacgtctactttcaacttccacccaaacgtgcgcccc
gtgcccttggagctgcacattcagggcttcaacatcagccacacacagactcgcctgctg
tctatggccaagcctgtgtatcatgctatcaccaagcactcgcccaagaagcctgtcatc
gtttttgtgccgtcacgcaagcagacccgcctcactgcgattgacatcctcaccacatgt
gctgcggacatccagcggcagaggttcttacactgcaccgagaaggatctgatcccgtac
ctggagaaactgagtgacagcacgctcaaggaaacgctgttaaatggggtgggctacctg
cacgaggggctcagccccatggagcgccgcctggtggagcagctcttcagctcaggggcc
atccaggtggtggtagcttctcggagtctctgctggggcatgagcgtggccgcccacctg
gtgatcataatggacacccagtactacaatggcaagatccatgcgtacgtggactacccc
atctatgacgtgcttcagatggtggggcatgccaaccggcccctgcaggacgatgagggg
cgctgtgtcatcatgtgccagggctccaaaaaggatttcttcaagaagtttttatatgag
cccttgccagtagagtctcacctggaccactgcatgcatgaccacttcaacgctgagatt
gtcaccaagaccattgagaacaagcaggatgctgtggactacctcacctggacctttctg
taccgccgcatgacacagaaccccaactactacaacctgcagggcatctcccaccgtcac
ctgtctgaccacctgtcagagctggtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcatagaggacgagatggacgtggcgcccctcaacctgggcatgattgctgcc
tactactacatcaactacaccaccattgagctcttcagcatgtccttgaatgccaagact
aaggtgcgggggctcatcgaaatcatctccaatgcggccgagtatgagaatattcccatc
cggcaccacgaggacaaccttctgcggcagttggctcagaaggtcccgcacaagctgaac
aaccctaagttcaatgacccacacgtcaagaccaacctgctcctgcaggctcacctgtcc
cgcatgcagctgagtgctgagctgcagtcagataccgaggagatccttagcaaggcgatc
cggctcatacaggcctgtgtggatgtcctctccagcaatgggtggctcagtcctgctctg
gcagccatggaactggcccagatggtcacccaggccatgtggtccaaggactcatacctg
aagcagctgccacatttcacctcagagcacatcaaacgttgcacagacaagggcgtggag
agtgtttttgacatcatggagatggaggatgaagagcgaaatgcgctgcttcagctctcc
gacggccagatggcagacgtggcccgcttctgtaaccgctaccctaacattgagctgtca
tacgaagtggtggataaggacggcatccgcagtggaggtcctgttgtggtgctggtacag
ctggagcgagaggaggaagtcacaggtcctgtgattgcacctctcttcccacagaaacgt
gaagagggctggtgggtggtgatcggagatgccaagtccaatagcctcatctccatcaag
aggctgaccctgcagcagaaggccaaggtgaagcttgactttgtggccccggccactgga
gcccacaactacaccctgtacttcatgagtgacgcgtacatgggatgtgaccaggaatac
aaattcagtgtggatgtgaaagaagctgagacagacagcgactcggattga
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integrated database retrieval system