KEGG   Miniopterus natalensis (Natal long-fingered bat): 107542039
Entry
107542039         CDS       T05883                                 
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13]
Organism
mna  Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107542039 (SNRNP200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mna03041]
    107542039 (SNRNP200)
Enzymes [BR:mna01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     107542039 (SNRNP200)
Spliceosome [BR:mna03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107542039 (SNRNP200)
 Complex C
   U5 SnRNP specific factors
    107542039 (SNRNP200)
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 PhoH SWI2_SNF2 DUF603
Other DBs
NCBI-GeneID: 107542039
NCBI-ProteinID: XP_016074728
LinkDB
Position
Unknown
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDGQMADVARFCNRYPNIELSYEVVDKDGIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaggcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacccgccgggatgaacccacgggagaggtg
ctatccctggttgggaagctggaaggcacccggatgggagataaggctcaacggaccaaa
ccacagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggaccggcacgac
atcaacaagatgaaggggtacactctgctctcagagggcattgatgagatggtgggcatc
atctataagcccaaaaccaaagagactcgggagacctacgaagtgctgctcagcttcatc
caggctgcccttggggaccagccacgtgatattctgtgtggggcagctgatgaagttctg
gctgtcctaaagaacgaaaagctgcgtgacaaggaaaggagaaaggagattgacctcttg
ctggggcagacagatgataccagataccatgtgctagtgaacttgggcaaaaagatcaca
gactatggcggagataaggaaatccagaatatggatgacaacattgatgagacatacggt
gtgaatgtacagtttgagtctgacgaggaggagggcgatgaagatgtgtatggagaggtt
cgagaagaggcgtcagatgacgacatggaaggggatgaggcagtggtgcgctgcaccctc
tcagctaaccttgtagcctctggtgaactgatgagttctaagaagaaggatttgcaccct
cgggacattgatgcgttttggctgcaacggcagctcagtcgcttctatgatgatgccatt
gtgtcgcaaaagaaggcagatgaagtgttggaaatcttaaagacggccagtgatgaccgg
gagtgtgagaaccagctggtgctcctcctcggtttcaatacttttgattttattaaagtg
ctgcggcagcacaggatgatgattttatactgcaccttgctggccagcgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagctatcaaagttcctt
taccagctccatgaaacggagaaggaggatctgatccgggaggagcggtcccggagggag
cgagtgcggcagtcccgaatggacactgacctggaaaccatggatttggaccagggcggg
gaggcattggctccgaggcaggttctggacttggaggacctggtttttacccaagggagc
cacttcatggccaacaaacgctgtcaacttccagatggatccttccggcgccagcgcaag
ggctatgaagaggtgcatgtgcctgctctgaagcccaagccctttggctcagaggaacaa
ttgcttccagtggagaagctgcccaagtatgcccaggctggattcgagggcttcaagaca
ctgaaccgtatccagagcaagctctaccgggccgccctggagacggacgagaacctgcta
ctgtgcgctcccactggcgccgggaagaccaacgtggccctaatgtgcatgcttcgggag
atcgggaagcacattaacatggacggcactatcaacgtggatgacttcaagatcatctac
atcgctcccatgcgatccttggtgcaggagatggtgggcagctttggaaagcgcctggcc
acgtatggcattactgttgcagaactgactggcgaccaccagctgtgcaaggaggagatc
agtgccactcagatcatcgtctgtacccctgagaagtgggacatcattacccgcaagggt
ggggagcgcacctatactcagcttgtgcggctcatcattctggatgagatccatcttctc
cacgatgacagaggtcctgtcttggaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtcagactcattgggctgagcgccaccctccccaactatgaagat
gtggccacctttctgcgtgttgatcctgccaagggcctcttctacttcgacaatagcttc
cgcccggtgcctctggaacagacgtatgtcggcatcacagagaaaaaagccatcaagcgt
ttccaaatcatgaatgaaatagtctatgagaagatcatggaacatgcaggaaaaaatcag
gtgctggtgtttgtccactcccggaaggagactgggaagacggccagggccatccgggac
atgtgcctggagaaggacactctgggtctgtttctgagagagggctctgcctccacagaa
gtcttgcggacggaggctgagcagtgcaagaacctggagctgaaggatcttctgccctac
ggctttgctattcaccatgcgggcatgaccagagttgacaggacacttgtagaggatctt
tttgctgataaacacattcaggttttagtttccacagcaactctggcttggggtgtgaac
ctccctgcacatacagtcatcatcaaaggcacccaggtttatagtccagagaagggacgc
tggacagaactgggggcactggacattctgcagatgctgggacgagccggaagaccccag
tatgacaccaagggcgaaggcatactcatcacatctcacggggagcttcagtactacctg
tcccttctcaaccagcagcttcccattgagagccagatggtgtcaaagctgcctgacatg
ctcaatgcggaaattgtgctggggaatgtccagaatgcaaaggatgcggtgaactggctg
ggctatgcctacctgtatatccgaatgctccgatctccaaccctctacggcatctctcat
gacgacctcaagggagaccctctgctggaccagcgccgcctggatctggttcatactgct
gccttgatgctggataagaacaacctggtcaagtatgacaagaagacaggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaatgatacagtacagacc
tacaatcagctgctgaagcccactctgagcgagattgagctcttcagagtcttctcgttg
tcttcagagttcaagaacatcaccgtgagagaggaggagaagctggagctgcagaagctg
ctggaaagggtgcccattcctgtaaaggagagcattgaggaacctagtgcgaagatcaat
gtgcttctccaagccttcatctcacagctgaaattggagggctttgcactgatggctgac
atggtatatgtcacacagtcagcgggccggttgatgcgggccatatttgaaattgtcctg
aaccgaggttgggcacagcttacagacaagaccctgaacctctgcaagatgatcgataaa
cgcatgtggcagtccatgtgtccgttgcgtcagttccggaaactccctgaggaagtagtg
aagaagattgagaagaaaaacttcccctttgagcgcctctatgacctgaatcataatgag
ataggggagctcattcgcatgccgaagatgggcaagaccatccacaaatatgtccacctg
ttccccaaattggagctgtcagtgcacctgcagcccatcacgcgctccaccctgaaagtg
gaactaaccatcacgccagacttccagtgggatgaaaaggtccatggctcgtccgaggcg
ttctggattctggtggaggatgtggacagcgaggtgatactgcaccatgagtacttcctt
ctcaaggccaagtatgctcaggacgagcacctcattaccttctttgtgcctgtctttgaa
ccgctgccccctcagtacttcatccgcgtggtgtctgaccgctggctctcttgtgagacc
cagcttcctgtttccttccgacacctgatcttgccagagaagtatccacctcccactgaa
cttctggacctgcagcccttgcccgtgtctgccttgagaaacagtgccttcgagagcctt
taccaagataaatttcctttcttcaaccccatccagacccaagtgtttaacaccgtgtac
aacagtgacgacaatgtgtttgtgggggcacccaccggcagtgggaagaccatctgtgca
gagttcgccatcctgcgcatgctgctgcagagctcggaggggcgctgtgtctacatcacc
cccatggaggcactggcagagcaggtgtacatggactggtacgagaagttccaggacagg
ctcagcaagaaggtggtgctcttgacaggcgagaccagcacggacctaaagcttctgggc
aaaggcaacatcatcatcagcactcccgagaagtgggacatcctctcccggcgctggaag
cagcgcaagaacgtccagaatatcaacctcttcgtggtggatgaggtccacctcatcggg
ggcgagaatgggcctgtcttggaagtgatctgctcccggatgcgctatatctcctcccag
attgagcggcccattcgcattgtggcacttagctcctcactctcaaatgctaaggatgtg
gcccactggctggggtgcagtgccacgtctactttcaacttccacccaaacgtgcgcccc
gtgcccttggagctgcacattcagggcttcaacatcagccacacacagactcgcctgctg
tctatggccaagcctgtgtatcatgctatcaccaagcactcgcccaagaagcctgtcatc
gtttttgtgccgtcacgcaagcagacccgcctcactgcgattgacatcctcaccacatgt
gctgcggacatccagcggcagaggttcttacactgcaccgagaaggatctgatcccgtac
ctggagaaactgagtgacagcacgctcaaggaaacgctgttaaatggggtgggctacctg
cacgaggggctcagccccatggagcgccgcctggtggagcagctcttcagctcaggggcc
atccaggtggtggtagcttctcggagtctctgctggggcatgagcgtggccgcccacctg
gtgatcataatggacacccagtactacaatggcaagatccatgcgtacgtggactacccc
atctatgacgtgcttcagatggtggggcatgccaaccggcccctgcaggacgatgagggg
cgctgtgtcatcatgtgccagggctccaaaaaggatttcttcaagaagtttttatatgag
cccttgccagtagagtctcacctggaccactgcatgcatgaccacttcaacgctgagatt
gtcaccaagaccattgagaacaagcaggatgctgtggactacctcacctggacctttctg
taccgccgcatgacacagaaccccaactactacaacctgcagggcatctcccaccgtcac
ctgtctgaccacctgtcagagctggtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcatagaggacgagatggacgtggcgcccctcaacctgggcatgattgctgcc
tactactacatcaactacaccaccattgagctcttcagcatgtccttgaatgccaagact
aaggtgcgggggctcatcgaaatcatctccaatgcggccgagtatgagaatattcccatc
cggcaccacgaggacaaccttctgcggcagttggctcagaaggtcccgcacaagctgaac
aaccctaagttcaatgacccacacgtcaagaccaacctgctcctgcaggctcacctgtcc
cgcatgcagctgagtgctgagctgcagtcagataccgaggagatccttagcaaggcgatc
cggctcatacaggcctgtgtggatgtcctctccagcaatgggtggctcagtcctgctctg
gcagccatggaactggcccagatggtcacccaggccatgtggtccaaggactcatacctg
aagcagctgccacatttcacctcagagcacatcaaacgttgcacagacaagggcgtggag
agtgtttttgacatcatggagatggaggatgaagagcgaaatgcgctgcttcagctctcc
gacggccagatggcagacgtggcccgcttctgtaaccgctaccctaacattgagctgtca
tacgaagtggtggataaggacggcatccgcagtggaggtcctgttgtggtgctggtacag
ctggagcgagaggaggaagtcacaggtcctgtgattgcacctctcttcccacagaaacgt
gaagagggctggtgggtggtgatcggagatgccaagtccaatagcctcatctccatcaag
aggctgaccctgcagcagaaggccaaggtgaagcttgactttgtggccccggccactgga
gcccacaactacaccctgtacttcatgagtgacgcgtacatgggatgtgaccaggaatac
aaattcagtgtggatgtgaaagaagctgagacagacagcgactcggattga

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