Monoraphidium neglectum: MNEG_2780
Help
Entry
MNEG_2780 CDS
T05028
Name
(RefSeq) putative DNA mismatch repair protein Msh6-2
KO
K08737
DNA mismatch repair protein MSH6
Organism
mng
Monoraphidium neglectum
Pathway
mng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MNEG_2780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mng03400
]
MNEG_2780
DNA repair and recombination proteins [BR:
mng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MNEG_2780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
HAUS4
MutS_II
AAA_29
AAA_23
TFIIA
Motif
Other DBs
NCBI-GeneID:
25735658
NCBI-ProteinID:
XP_013904200
UniProt:
A0A0D2NK74
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MPRSQAGSAAAARKLLERRLVKIYTPGTAVDGLLADDLGQDARPFLCVVEAATGPGGGGV
AAFGVCVVDVAAAQVHVGSFREGSPARPALCTALVRFDPVEVLCTRGALSSPTLAALDAH
CRPAGGAGAGAVLAPLAPAATAGCGGAGEARRLLSRALPPAALRALADLLPSASVQQWSA
PQLDGQQHINGPNRSNGDAGGLGGLGLQALAMAVGQLQRCGLAEELLPTLMFAPLDVDGV
PTGAMEAGRSGGDGYSQQPAHPPQRQHMLLDDRALSTLHVLQGPLGERRGSLFAALDGTA
SAAGRRQLRHWLCRPLTVSSLIEERLAVVDLFKEYPTLASALQSALKRMPDTERLLPRAA
RALQALLRRAGGGGGDAGGGRLGGEAAGPRVAEEGAGSQDAWLEAVGEGQLSDQWLQRQG
SVPHPVATAAAKQGRQPAWRGLLQARQQQQQNHAQQQPQQSTRQHHVPARSAWGAAGGAS
AAGGVDADPADGAWAADARQSTWRAVRQLPAALSALVEAVAMLRRQMGQLGVSSSKLPLV
HRAVVEAARCAGPVAEVSRLLEGAEWTQQAGGGESGASSFGEGGLRLAKGADEGCDEAAK
ELRAAEERLTSATREALTMFGGSAAGRQQQQHQQRVGGGQKRQQQKGKQQEAAAGASVVD
VEGGLLQVPATCGGLLAPPHFEFAGHGSAPATILVRCPTLQRLAAARAAAVQSMTDATAA
ALRAAAGQLLGSYAPLAALVQVAAELDVLAGFAAVTEAAPPGAAFCRPVFAAAAAAGAGS
AAGTPPLHFKGLWHPLLMACGAGAAPPMGQPNDLLLGGEQPGALLLTGANTSGKSTLLRA
ACVAAICAQVGCYAPAAEALVSPVDGIFTRMGAQDRIMLGQSTFAVEMAEASLAMALATP
SSLLVLDELGRGTSTFDGCALAYAVLDHLTGGGGGSSGGRGRGGAAPRVLFATHYHRLTL
EPGLSGRVQLAHMASELYLEQQCVLNAAEGLANEAEALLASLGLSDTHSSPPPAPAASGA
AAGPGAAAGPAAAAAQAASALRGAGLACSAATYASLGRHLQVARAMQRLQLPDAPTSSLA
GRKGTPGIAGLHQQQQQQQQQQAEERDVDPQRDGSPWHLLGVTPETLRQQHCLHRAAAQR
AHAGAAREVEARLSALADSIISAVMGAGASGDPSAAAHAAQAVRDAVAAAGEAEAEAGRL
LRRHAALCRGYLDALGSVHGVLLQLVEGSLVGKQARLDAEHCRWLVSHVRTLHSKLRVLQ
SQLHVATYTSESVPALKAVAATLAAEEDEARTTIKQVRPAQLNPGSPSSHPASFRMLRNR
VRSRHCTRTDFPRTLRPGRALDGRARECMPPWSFALV
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagccaggccggttccgcagcagctgccaggaagctgctggagcggcggctg
gtcaagatctacacaccaggcacggccgtcgacggcctactggcggacgacctagggcag
gatgcgcgccccttcctgtgcgtggttgaggcggctacggggcccggaggaggcggcgtc
gcggcctttggcgtctgcgtggtggacgttgctgcggcacaggtgcatgtcggctcgttc
agggagggctccccggcgcgccccgcgctgtgcactgctttggtgcgcttcgaccccgtc
gaggtcctctgcacccgcggcgccctgtccagccccaccctcgccgccctcgacgcacac
tgccgccccgccggcggcgccggcgctggagcggtgctcgccccgctcgcgccggcggcg
acggcggggtgcgggggcgcgggggaggcgcggcggctgctgtctcgcgcgctgccgcca
gctgctctgcgcgcgttggccgatctgttgccatcagccagcgtgcagcagtggagcgcc
ccgcagctggatggtcagcagcatatcaatggcccgaaccgcagcaacggcgacgcgggc
gggctgggcgggctggggctgcaggcgctggccatggctgtggggcagctgcagcgatgc
gggctggcggaggagctgctgccgacgctgatgtttgctccgctggacgtggatggagtc
cccacgggggccatggaggctggtcgtagcggcggcgacggctattcccagcagccggcg
cacccgccgcagcgccagcacatgctgctggacgaccgcgccctgtcaacgctgcacgtg
ctgcaggggcccctcggggagcggcgcggctctcttttcgcagcgctcgacggcaccgcc
agcgccgctgggaggcggcagctccgccactggctgtgcaggccgctgactgtgtccagc
ctgattgaggagcgcctggccgtggtggacctcttcaaagagtaccccacgctcgccagc
gccctgcaatccgcgctgaagcgcatgcctgacacggagcgcctgctgccccgcgccgcg
cgcgctctgcaggcgctgctgcggcgcgcgggcggcggcggcggggacgccggcggcggg
cggctcggcggggaggcggcggggccgcgggtggctgaggagggggctggctcgcaggat
gcctggttagaggcggtgggggaggggcagctgtcggatcagtggctgcagcggcagggc
agcgtgccgcacccagtggcgactgcggcagcaaagcaggggcggcagccggcgtggcgg
ggtctgttgcaggcgcggcagcagcagcagcaaaaccatgcccagcagcagccgcagcag
tccacacgccagcaccacgtcccagcgcgcagcgcctggggcgccgccgggggggccagc
gccgcgggcggcgttgatgcagaccctgctgatggcgcttgggcggccgacgcccgccag
tccacgtggcgtgcggtgcgacagctgccagcggcgctgtctgcgctcgtagaggcggtc
gccatgctgcgcaggcagatgggccagctgggcgtctcgtcctcgaagctgccgcttgtc
cacagggcggttgtggaggcggcccgctgcgcagggccggtggctgaggtgtcgcggctg
ctggagggggcggagtggacgcagcaggctggcgggggcgagagcggggcgtcatctttc
ggtgaaggaggcctgaggctggcaaagggtgcggacgaagggtgcgacgaggcggcgaag
gagctgcgggcagctgaggagcggctgacctctgcaacacgcgaggcgctcacgatgttt
gggggcagcgccgcaggtcggcagcagcagcagcatcagcagcgcgtcggcggaggccag
aagcggcagcagcagaaggggaagcagcaggaggcggcggcgggcgcgagtgtcgtcgat
gtcgagggggggcttttgcaggtgcctgctacttgcggcggcttgctggcgccgccccac
tttgagtttgctggccatggctcagcccctgccaccatcctggtgcgctgcccgacgctg
cagcggctcgccgccgcccgagccgccgccgtgcagtcgatgactgacgcaaccgcggcc
gcgctccgggcggcggccgggcagctgctgggcagctatgcccccttggcagccctggtg
caagtagctgcggagctggacgtgctcgcggggtttgcggcggtcacggaggcggcgccg
cctggcgcagcgttctgcaggcccgtgtttgcagctgccgcggctgccggcgcaggctcc
gccgcgggcacgccacctctgcacttcaaaggcctctggcacccgctgttgatggcgtgc
ggcgcgggggcggcccctcccatggggcagcccaacgacctgctgctgggtggggagcag
ccgggggcactgctgctcacaggcgccaacaccagcggcaagagcacgctgctgcgtgcc
gcgtgcgtcgccgccatctgcgcccaggtcggctgctacgcgccagccgccgaggctcta
gtcagccccgtggacggcatcttcacacgcatgggggcgcaggaccgcatcatgctgggc
cagtccacctttgccgtggagatggctgaggcgtcgctggcgatggccctggccaccccc
agctcactcctggtgctggacgagctcggcaggggcaccagcacgtttgacggctgcgcc
ctcgcgtacgccgttctggaccacctcacgggcggtggcggtggcagcagcggcggccgt
ggccgtggcggcgcggcgccgcgcgtgctgtttgcgacgcactaccaccgcctgacgctg
gagccgggcttgtcgggccgcgtgcagctcgcccacatggcctcggagctgtaccttgag
cagcagtgcgtgctgaacgccgcggaggggcttgctaacgaggcagaggccctgctggcc
agcctcgggctctcggacacccacagcagtccaccgcccgcccccgcggcctccggggcc
gcggcgggcccgggcgcggccgcaggcccggcggcggcggccgcgcaggcggcgagcgcg
ctgcggggagccgggctggcttgcagcgcggccacgtacgcgtcactcgggcggcacctg
caggtggccagggccatgcagcggctacaactgccagacgccccaacctccagcttggcg
ggccgcaaggggacaccaggcattgcaggcctacaccaacagcagcagcagcagcagcag
cagcaggcagaggaacgcgatgtggacccgcagcgggacggcagcccgtggcacctcctg
ggcgtgacgcccgagacgctgcggcagcagcactgcctgcacagagccgccgctcagcgc
gcgcacgccggggcagcgcgcgaagtggaggcgcggctgtcggcgctcgcggactcaatt
atatctgccgtcatgggggccggcgcgtcgggcgacccgtccgcggcggcgcacgcggcg
caggcggtccgcgacgcggtcgccgccgccggcgaggccgaggccgaggccggccgcctg
ctgcggcgccacgcggcgctgtgccggggctacttggacgcgctggggtcggtgcatggg
gtgctgctgcagctggtggaggggagcctggtgggcaagcaggcgcggctggacgcggag
cactgcaggtggctggtcagccacgtcaggacgctgcacagcaagctgcgcgtgctgcag
tcgcagctgcacgtcgccacctacacctcggagagcgtccccgcgctcaaggccgtcgcg
gcgacgctggccgcggaggaggacgaggcacgcaccaccatcaagcaggtgcggcccgcc
cagctcaatcccggctcgccaagctcccacccggcttcctttcgaatgctgcgaaatcgc
gtgcgctcccggcactgcacgcgcaccgacttccctcggacactacgccctggccgcgct
ttggatggtcgagcccgcgagtgcatgccgccatggtcgtttgctttggtttaa
DBGET
integrated database retrieval system
