KEGG   Mesorhizobium opportunistum: Mesop_0077Help
Entry
Mesop_0077        CDS       T01542                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mop  Mesorhizobium opportunistum
Pathway
mop03030  DNA replication
mop03410  Base excision repair
mop03420  Nucleotide excision repair
mop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mesop_0077
   03410 Base excision repair
    Mesop_0077
   03420 Nucleotide excision repair
    Mesop_0077
   03430 Mismatch repair
    Mesop_0077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mop03032]
    Mesop_0077
   03400 DNA repair and recombination proteins [BR:mop03400]
    Mesop_0077
Enzymes [BR:mop01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mesop_0077
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mesop_0077
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mesop_0077
DNA replication proteins [BR:mop03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mesop_0077
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mesop_0077
DNA repair and recombination proteins [BR:mop03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mesop_0077
   NER (nucleotide excision repair)
    Other NER factors
     Mesop_0077
   MMR (mismatch exicision repair)
    Other MMR factors
     Mesop_0077
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N DUF4262
Motif
Other DBs
NCBI-ProteinID: AEH84574
UniProt: F7YFC1
LinkDB All DBs
Position
81338..82939
Genome map
AA seq 533 aa AA seqDB search
MNRFAELLDRLVLTPSRNGKLTLLTDYFRSVEDPDRGLALAAITGDLNIAAIKPAMLRTL
VTERMDPVLFGYSYDYVGDLAETVSLVWPQTSGHIPNREPTLGEVVAKLQAASRSDGPKI
LAGLLDSAGISSRFAIIKLVTGGLRIGVSARLAKQALADFGKVDVAEIEELWHGLSPPYT
ALFAWLEGKADKPHNTALALFRPVMLSNPIGDGDLEKLDPADYAAEWKWDGIRVQAVAEG
GVRRLYSRTGDDVSGAFPDLADAMNFSATLDGELLVGDPREATGTFSDLQQRLNRKTVTP
KMQQQYPAFMRCYDLLQIGGEDLRGLSFRERRTRLEAFMGTLDPSRFDLSPFVDFTDWQA
LEDLRRAPPHPIIEGVMLKRWDSAYVAGRPKGPWFKWKRDPHTVDAVLMYAQRGHGKRSS
FYSDYTFGVWSGAEGEEELVPVGKAYFGFTDEELRQIDKYVRDNTVERFGPVRSVRADRD
NGLVLEVAFEGLNRSTRHKSGVAMRFPRISRLRWDKPANEADRIETLQALLDR
NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgcttcgccgagcttctcgatcgcctggtgctgacgccgtcgcgcaatggcaag
ctgaccttgctgaccgactatttccgcagcgtcgaggacccggaccgcggcctggcgctg
gccgccatcacaggcgacctcaacatagccgcgatcaagccggcaatgctgcgcacgctg
gtcaccgaacgcatggacccggtgctgttcggctattcctatgactatgtcggcgatctc
gccgagacggtgtcgctggtctggccgcagacatcggggcacatcccgaaccgcgagccg
acgcttggcgaggttgtggcgaaactgcaggcggcgagccgctcggacggcccgaagata
ctggcggggctgctcgacagtgccggcatctcgtcgcgcttcgccatcatcaagctggtc
accggcggcctgcgcatcggtgtgtcggcgcggctcgccaaacaggcgctggcggatttc
ggcaaggtcgatgtcgccgagatcgaggagctctggcacggattgtcgccgccttacacg
gcgctgtttgcctggctggagggcaaggccgacaaaccccacaacaccgcgttggcgctg
ttccgcccggtgatgctgtcgaacccgatcggtgacggcgatctcgaaaagcttgatccc
gccgactatgcggcggaatggaaatgggacggcatccgcgtccaggcggtggccgaaggc
ggtgtccgccggctctattcgcgcaccggagacgatgtctccggcgcctttcccgatctt
gccgacgccatgaatttttcggcgacgctcgacggcgagctgctggtcggcgatcccaga
gaggcgacaggaaccttttcggacctgcagcagcggctgaaccgcaagacggtgaccccg
aagatgcagcagcaatacccggccttcatgcgctgctacgacctgctgcagatcggcggc
gaggatctgcgcggattgtcgttccgcgaacggcgcacccgcctcgaagccttcatgggg
acgctcgacccgagccgcttcgatctgtcgcccttcgtcgacttcaccgactggcaggcg
ctggaggatttacgccgggcgccgccgcatccgatcatcgaaggggtgatgctcaagcgc
tgggattcggcctatgtcgccggccggccgaaaggcccatggttcaaatggaagcgcgac
ccgcacacggtggacgcggtgctgatgtatgcccagcgcggccatggcaagcggtcgagc
ttctactcggactacacgttcggcgtctggtccggagccgagggcgaggaggaactggtg
ccggtaggcaaggcctatttcggcttcaccgacgaggagctgaggcagatcgacaaatat
gtccgcgacaacacagtcgagcgtttcggaccggtgcgctcggtgcgggccgaccgcgac
aatgggctggtgctggaagtcgccttcgaagggctcaaccgctcgacccggcacaaatcc
ggcgtcgccatgcgctttccccgcatttcgcggctgcgctgggacaagccggccaacgag
gccgaccgaatcgagacgctgcaggcactgctcgaccgatag

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