Methylobacterium oryzae: MOC_4308
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Entry
MOC_4308 CDS
T03299
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_4308
Enzymes [BR:
mor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MOC_4308
DNA repair and recombination proteins [BR:
mor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MOC_4308
Prokaryotic type
MOC_4308
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AIQ92063
UniProt:
A0A089P1Z5
LinkDB
All DBs
Position
complement(4320911..4322440)
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AA seq
509 aa
AA seq
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MQDRTRARPEGSTAAFHPRRPDGRIARTLYLLQPSFRRGAPSKGQVSMAIQGERIRILND
VEPRGDGAYVLYLLQQANRATFNPALELAIEEANRLGLPVVACFGLLDGASGFPEANARH
YAFLLQGLADAKAGLEKRGIGFVMRKVSPAQIAIDLAADAALLVLDRGYLAIQKGWYREI
AGAVTTRIVQVEGDVVVPVETASGKHEYAARTLRPKLNRLWDPFIAALKPRTVKHKADRL
KLKSAVDVSDPEAVLAGMSLDRAVGPVKRFTGGETQARKRLKAFLKDGFAGYGAGRNRPE
AAAASHMSPYLHFGQISPVEIALAVREAGIGDSDDRGAYLEELIVRRELAMNHVFYTEGY
DDYDKAVPDWARKTLAEHATDARPHAYSEKQLAAGETHDRYWNAAMREMRETGYMHNQLR
MYWGKKILEWSPSPKEGFARTLRLNNRYFLDGRDPNSFTNVAWVYGLHDRPWQKRKIFGT
VRYQSENSLKKFDAKAYVRAVETLCAAEG
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggatcgaacccgggcccggcccgagggttcgactgcggcttttcatccgcgccgt
ccggacggacgaattgcccgaacgctctaccttctccagccaagtttccggcgcggcgcg
ccaagcaaggggcaggtcagcatggcgatccagggtgagcggatccggatcctcaacgat
gtcgagccccgcggagacggcgcctacgtcctgtacctgttgcagcaggccaaccgggcg
acgttcaacccggccctcgaactcgccatcgaggaggcgaaccgcctcggcctgccggtc
gtcgcctgcttcggcctgctcgacggcgccagcggctttcccgaagccaatgcccggcac
tacgccttcctgctgcagggtctcgcggatgcgaaggcgggcctggagaagcgcgggatc
ggcttcgtcatgcgcaaggtctcgcccgcgcaaatcgccatcgacctcgccgcggacgcg
gcgctcctcgtcctcgaccgcggctatctcgccatccagaagggctggtaccgggagatc
gccggggcggtgacgacgcggatcgtccaggtcgagggcgacgtcgtcgtgccggtcgag
acggcctcgggaaagcacgaatacgccgcccggacgctgcggccgaagctgaaccggctg
tgggacccgttcatcgcggcgctgaagccccgcacggtgaagcacaaggccgatcgcctg
aagctgaagagcgcggtcgacgtctccgatccggaggcggtgctcgccgggatgagcctc
gaccgggcggtcgggccggtgaagcgtttcaccggcggcgagacgcaggcccgcaagcgc
ctgaaggcgttcctgaaggacgggtttgccggctacggcgcggggcgcaacaggccggag
gcggcggccgcctcgcacatgagcccgtacctgcatttcgggcagatctcgccggtcgag
atcgccctggcggtccgggaggccgggatcggcgattccgacgaccgcggtgcctatctg
gaggagctgatcgtccggcgcgagctcgccatgaaccacgtcttctacacggagggttac
gacgactacgacaaggccgtgccggactgggcgcgcaagacgctggccgagcacgcgacg
gacgcgcgcccgcacgcctactcggagaagcagctcgccgccggcgagacccacgaccgc
tactggaacgccgcgatgcgcgagatgcgcgagaccggctacatgcacaatcagctgcgg
atgtactggggcaagaagatcctcgaatggtccccgtcgccgaaggaaggcttcgcccgg
acgctgcggctgaacaaccgctacttcctcgacgggcgcgatccgaactccttcaccaac
gtcgcctgggtgtacggcctgcacgaccggccctggcagaagcgcaagatcttcggcacc
gtgcggtatcagagcgagaactcgctcaagaagttcgacgccaaggcctatgtgcgggcc
gtggagacgctctgcgcggccgaggggtga
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