KEGG   Mus pahari (shrew mouse): 110317673
Entry
110317673         CDS       T05929                                 
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110317673 (Mms19)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110317673 (Mms19)
SSDB
Motif
Pfam: MMS19_C MMS19_N
Other DBs
NCBI-GeneID: 110317673
NCBI-ProteinID: XP_021047955
Ensembl: MGP_PahariEiJ_G0014451
LinkDB
Position
1:complement(153362822..153402325)
AA seq 1031 aa
MAAATALEEAAAPMGALCGLVQDFVMGQQEGPADQVAADVKSGVYTVLQVVEALGSSLEN
AEPRTRARGTQLLSQVLLQCHSLLSEKEVVHLILFYENRLKDHHLVVPSVLQGLRALSMS
VALPPGLAVSVLKAIFQEVHVQSLLQVDRHTVFSIITNFMRSREEELKGLGADFTFGFIQ
VMDGEKDPRNLLLAFRIVHDLISKDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRE
DLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASERVEAEGLAALHSLTACLSCSVLRADAEDLLDSFLSNILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACEHLTSNVLPLLLEQFHKHSQSNQRRTILEMILG
FLKLQQKWSYEDRDERPLSSFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPGLLSA
EDLELTVGHLYRLTFLEEDSQSCRVAALEASGTLATLYPGAFSRHFLPKLAEELHKEESD
VARADAPTKCSRHFRCLQALSAVSTHPSIVKETLPLLLQHLCQANKGNMVTEPSEVVAVC
QSLQQVAEKCQQDPESYWYFHKTAVPCLFALAVQASMPEKESSVLRKVLLEDEVLAALAS
VIGTATTHLSPELAAQSVTCIVPLFLDGNTSFLPENSFPDQFQPFQDGSSGQRRLVALLT
AFVCSLPRNVEIPQLNRLMQELLKQSCGHSCPFSSTAATKCFAGLLNKQPPGQQLEELLQ
LAVSTVEAGLASEPSRGQAFTLLLWVTKALVLRYHPLSACLTTRLMGLLSDPELGCAAAD
GFALLMSDCTDVLTRAGHADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKF
LNLSSSYSMAVRIAALQCMHALTRLPTSVLLPYKSQVIRALAKPLDDKKRLVRKEAVSAR
GEWFLLGSPGS
NT seq 3096 nt   +upstreamnt  +downstreamnt
atggctgctgccaccgctctggaggaggcagcggcgcctatgggcgccctgtgtggcctc
gtgcaagacttcgtcatgggtcagcaggaggggcccgctgaccaggtggctgcagatgtg
aagtccggtgtctatacagtgttacaagtagtagaagcccttgggtcctctctggaaaat
gcagaaccccgaactcgggctcgaggaacccagcttttgtcacaggtgctgctccagtgt
cactccttgctctcggagaaggaagtggtccacctgatcctgttctatgaaaaccggctg
aaggaccatcatcttgtggtcccatctgtccttcagggcctgagggcactgagcatgtct
gtggccctgcccccaggtctggctgtctctgtgcttaaagccatcttccaggaggtacat
gtacagtccctgctacaggtagaccgccacactgtcttcagcatcatcactaacttcatg
cgatcacgagaagaagagctgaagggtctaggagctgacttcacatttggcttcatccag
gtgatggatggagagaaggatccccgtaacctcttgttggctttccgcattgtccatgac
ctcatctccaaggactacagtctgggaccttttgtggaagagttatttgaagtgacatct
tgttatttccctattgattttacccctccacctaatgatccttatggcatccagagagag
gacctcatcctgagtctccgtgctgtgctggcgtctacaccacgctttgctgagttctta
ctgcctctgctaattgagaaagtggattctgagattttaagtgccaagctggattctctg
caaactctgaacgcttgctgtgctgtgtatggacagaaggagctaaaggacttcctgccc
agcctctgggcttccatccgtagagaggttttccagactgcaagtgagcgagtagaggca
gagggcctggcagctctccattccctgactgcatgcctctcgtgctctgtgctgagagct
gatgctgaggacctccttgactccttcctcagcaacattctgcaagactgcaggcaccat
ctgtgtgaaccagacatgaaacttgtatggcctagcgctaagctgttgcaggcagctgca
ggtgcgtctgcccgggcctgtgagcacctcaccagcaacgtgcttcccttgctgctggaa
cagttccacaagcacagtcagagcaaccagcggcggacaatccttgaaatgatcctggga
ttcttaaagctacagcagaaatggagctatgaagacagagatgaaaggcctctgagtagc
ttcaaagaccagctatgctcattggtgttcatggctctaacagaccccagcacccagctt
cagcttgttggcatccggacgctcacagtcttgggtgcccagccaggtctcctgtctgct
gaggacttggagctgacagtaggtcacctgtaccgactgaccttcctggaggaagattcc
cagagttgtagggtggcagcattggaggcatcaggaaccctggccactctgtaccctgga
gccttcagcagacactttctccccaagcttgctgaggagctgcataaagaggagtcagat
gtggctagagcagatgctcccaccaaatgttcccggcatttccgctgtctacaagctttg
tcagctgtttcaacacatcccagcattgtcaaggagacactgcctctgctactgcagcat
ctctgtcaagcaaacaaagggaatatggttacagagcccagtgaagttgttgctgtctgt
cagagtctccagcaggtggcagaaaaatgccagcaggaccctgagagctactggtatttc
cacaagacggctgtaccctgcctgtttgcattggctgtgcaggcttcgatgccagagaaa
gaatcctcagttctgagaaaagtactgttggaggacgaggtcttggctgcattggcatct
gtcattggcactgccactactcatctgagccctgaactagctgcccagagcgtcacatgc
atcgtgcccctcttcttagatggcaacacctcctttctacctgaaaacagcttccctgac
cagttccagccattccaggatggttcctctgggcagaggcggctggttgccctactcacg
gctttcgtctgctccctgccacgaaatgtggaaatccctcagctgaaccgactcatgcag
gagcttttgaagcagagctgtggccacagctgtcccttctcctccactgccgccaccaag
tgctttgcagggctcctcaacaagcaacctccagggcagcagttggaggagttgcttcag
ctcgctgtgagcacagtggaggccggcctggcctctgaaccctcccgtggtcaggctttc
acattgctgctctgggtaaccaaggctctagtcctcagataccaccctctcagtgcctgc
ctgaccacccgtctcatgggcctcctcagtgatccagagcttggctgtgcagcagctgat
ggcttcgctctgctcatgtctgactgcactgatgtgttgactcgtgccggccatgctgat
gttcggattatgttccgccagcggttcttcacagacaatgtgcctgccttggtccaaggt
ttccatgccgctccccaagatgtgaagccaaactatctgaagggtctatctcatgtactc
aacaggctgcccaagcctgtgcttttaccagagctgcccacacttctttccttgctgctg
gaagcactatcctgccctgactctgtggtccagctttccactctgagctgtctccaaccc
ctactactggaagcaccccaaatcatgagtcttcatgttgacactctggttacaaaattc
ctgaacctcagctccagttattcaatggctgtccggattgctgctctgcagtgtatgcac
gctctcactcgcctccccacttctgtgctactgccatacaaatctcaggtgatccgagcc
ttagccaagcctctggacgacaagaagagacttgtgcgcaaggaagcagtgtcagcgcgg
ggagaatggttcttactggggagccctgggagctga

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