Mus pahari (shrew mouse): 110319023 Help Entry 110319023         CDS       T05929                                  Symbol Thbs1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism mpah  Mus pahari (shrew mouse) Pathway mpah04015   Rap1 signaling pathway mpah04115   p53 signaling pathway mpah04145   Phagosome mpah04148   Efferocytosis mpah04151   PI3K-Akt signaling pathway mpah04350   TGF-beta signaling pathway mpah04510   Focal adhesion mpah04512   ECM-receptor interaction mpah04820   Cytoskeleton in muscle cells mpah05144   Malaria mpah05165   Human papillomavirus infection mpah05205   Proteoglycans in cancer mpah05206   MicroRNAs in cancer mpah05219   Bladder cancer Brite KEGG Orthology (KO) [BR:mpah00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     110319023 (Thbs1)    04350 TGF-beta signaling pathway     110319023 (Thbs1)    04151 PI3K-Akt signaling pathway     110319023 (Thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110319023 (Thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     110319023 (Thbs1)    04148 Efferocytosis     110319023 (Thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     110319023 (Thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     110319023 (Thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110319023 (Thbs1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     110319023 (Thbs1)    05205 Proteoglycans in cancer     110319023 (Thbs1)   09162 Cancer: specific types    05219 Bladder cancer     110319023 (Thbs1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110319023 (Thbs1)   09174 Infectious disease: parasitic    05144 Malaria     110319023 (Thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mpah04131]     110319023 (Thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mpah00536]     110319023 (Thbs1) Membrane trafficking [BR:mpah04131]  Endocytosis   Phagocytosis    Opsonins     110319023 (Thbs1) Glycosaminoglycan binding proteins [BR:mpah00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110319023 (Thbs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 cEGF TSP1_ADAMTS Laminin_G_2 Laminin_G_3 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  110319023 NCBI-ProteinID:  XP_021050075 Ensembl:  MGP_PahariEiJ_G0025555 LinkDB All DBs Position 3:101516421..101531944 Genome browser AA seq 1171 aa AA seqDB search MELLRGLGVMFLLHMCGSNRIPESGGDNGVFDIFELIGGARRGPGRRLVKGQDLSSPAFR IENANLIPAVPDDKFQDLLDAVRADKGFIFLASLRQMKKTRGTLLAVERKDNTGQIFSVV SNGKAGTLDLSLSLPGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCDKMESAELD VPIQSIFTRDLASVARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVL LTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGLSCDELSSMVLELNGLRTIVTTLQDSIR KVTEENRELVSELRRPPLCFHNGVQYKNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR ETKACKKDACPINGGWGPWSPWDICSVTCGGGVQRRSRLCNNPAPQFGGKDCVGDVTENQ VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDAC FNHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNK NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCKKDNCP NLPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLE HNPDQLDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENFDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTHPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDMKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggagctcctgcggggactaggtgtcatgttcctgttgcatatgtgtggaagcaaccga attccagagtctgggggagacaacggtgtgtttgacatctttgaactcattggaggtgca cgaaggggccctggtcgccgactggtgaagggccaagatctatccagccccgccttccgc attgagaatgccaacctgatccctgctgtgccggatgacaagttccaagacctactggac gctgtgcgggccgacaaaggtttcatcttcctggcctccttgaggcagatgaagaagact cggggcacgctcctggctgtggaacggaaagacaacactggccagatcttcagtgtggtc tccaacggcaaagcaggcaccctggacctgagtctaagcctaccggggaagcaacaagtg gtctcagtggaggaagctctcctggccactggccagtggaagagcatcacactgtttgtt caagaggaccgggcccaactctacatcgactgtgataagatggagagtgcggagctggac gtccccatccagagcatcttcaccagggatttggccagcgttgccaggctccgagttgca aagggcgatgtcaatgacaattttcagggggtgctgcagaatgtgaggtttgtctttgga acgaccccagaagacattctcaggaacaaaggctgctccagctcagctaccaacgtcctt ctcacccttgacaacaacgtggtgaacggttccagccctgctatccgcaccaactacatc ggccacaaaacaaaggacctccaagctatctgtggcctctcctgtgacgaactatccagc atggtcctggaactgaatggcctgcgcaccatcgtgaccacgctacaggacagcatccgc aaagtgacggaggagaacagagagctggtcagtgagctgaggcggcctcccctctgcttt cacaatggagtccagtacaagaacaacgaggagtggactgtggatagctgcacagagtgt cactgccagaactcggttaccatctgcaaaaaggtgtcctgtcccatcatgccctgctcc aacgccacagttcctgatggtgaatgctgcccacggtgttggcccagcgactctgctgac gatggctggtctccctggtctgagtggacttcctgctctgccacatgtggcaacgggatt cagcaacggggtcgttcctgtgacagcctcaacaacagatgcgagggctcttcagtacag acgaggacctgccacattcaggagtgcgacaaaagatttaaacaggatggtggctggagt cactggtccccatggtcgtcctgttctgtgacctgtggtgacggtgtgatcacaaggatc cggctctgcaactcccccagtccccagatgaacgggaagccctgtgaaggtgaagcccgg gagaccaaagcctgcaagaaagacgcctgcccaatcaatggaggctggggtccctggtca ccatgggacatctgctctgtcacctgtggaggaggagtgcagagacgcagccgactctgt aacaaccctgcaccccagtttggaggcaaggactgtgttggcgatgtgacagaaaatcaa gtttgcaacaagcaggactgtccgattgatggatgcctgtccaatccctgctttgctggt gccaagtgtactagctaccctgatggtagctggaaatgtggtgcatgtcctcctggctac agtggaaatggcatccagtgcaaagacgtcgatgagtgcaaagaagtgcctgatgcttgc ttcaatcacaacggagaacatcgatgcaagaacacggatcctggctacaactgcctgccc tgcccgccacgattcactggctcacagccctttggccgaggtgtcgaacatgccatggcc aacaaacaggtgtgcaaacctcgaaacccctgcaccgacgggacacatgactgcaacaag aacgccaagtgcaactacctgggtcactacagcgaccccatgtaccgctgtgagtgcaag cccggctacgcaggcaatggcatcatctgcggagaggacacagacctggacggctggcct aatgaaaacctggtgtgtgtggccaacgcaacctaccactgcaaaaaggacaactgcccc aaccttcccaactcagggcaggaagactatgacaaggatgggattggcgatgcctgtgat gacgacgatgacaatgacaagatccccgatgacagggacaactgtccattccattacaac ccagcccagtatgactatgacagagatgatgtgggagaccgctgcgacaactgcccctac aaccacaaccctgaccaagcagacacagacaacaatggggagggcgatgcctgtgctgtg gacatcgatggagatggaatcctcaatgaacgagacaactgccagtacgtttacaacgtg gaccagagggacacggacatggatggggttggagatcagtgtgacaactgccccctggaa cacaatccagaccagctggactctgactcagacctcataggggacacctgtgacaacaat caggacatcgatgaggatggccatcagaacaatctggacaactgtccctatgtgcctaat gccaaccaggccgaccatgataaagatggcaaaggagatgcctgtgaccatgacgatgac aatgatggcatccctgatgacagagacaactgcaggctggtgcccaatcctgaccagaag gactctgatggtgatggccgaggtgacgcctgcaaagatgactttgaccatgacaatgtg ccagacattgatgacatctgtcctgagaattttgatatcagtgaaaccgatttccgacga ttccagatgattccactagatcccaaaggaacctcccaaaatgaccctaactgggttgtc cgccatcagggcaaagaactcgtccagactgtaaactgtgaccctggacttgctgtaggt tatgatgagtttaatgctgtggacttcagcggtaccttcttcatcaacactgagagagat gatgactacgctggctttgttttcggctaccagtccagcagccgcttctacgtagtgatg tggaaacaagtcacccagtcctactgggacacccaccccacaagggctcagggatactca ggcctgtccgtaaaggttgtgaactccaccaccggccctggcgagcacctgcggaacgca ctgtggcatacaggaaacacccccggccaggtgcgcaccctgtggcatgaccctcgccac atcggctggaaagatttcactgcgtacagatggcgtctcagccacaggccaaagaccggt tttatcagagtggtgatgtatgaaggaaagaaaatcatggctgactccggacccatctat gacaaaacctacgccggcggtagactaggcctgttcgtcttctctcaagaaatggtgttc ttctcggacatgaaatacgagtgtcgagattcctaa

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