Mus pahari (shrew mouse): 110320054
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Entry
110320054 CDS
T05929
Symbol
Vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
110320054 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110320054 (Vti1a)
Membrane trafficking [BR:
mpah04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
110320054 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
Fusion_gly
DUF1664
Orf78
Laminin_II
DUF5344
Mer2
FapA
Peptidase_S46
Sec8_N
BPS1
Motif
Other DBs
NCBI-GeneID:
110320054
NCBI-ProteinID:
XP_021051588
Ensembl:
MGP_PahariEiJ_G0014573
LinkDB
All DBs
Position
1:166418851..166725757
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AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEARELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDAGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLREADAN
LGKSSRILTGMLRRIIQNRILLVILGIIVVIAILTAITFFVRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacttcgaagggtacgagcaggacttcgcagtgctcactgctgagatcacc
agcaagatttccagggtccctcggctccctccggatgagaagaagcaaatggttgccaat
gtggagaaacagcttgaagaggccagagaactgcttgaacagatggatttggaagttcga
gaaattccaccccaaagtcgaggaatgtatagcaacagaatgagaagctacaagcaagaa
atggggaaactggaaacggattttaaaaggtcacggatcgcctacagtgacgaagtacgg
aatgagctcctaggggatgctgggaattcctccgagaaccagttgataaaattacgtgaa
gagagggcacatctgctggataacacggagaggctggaaaggtcatctcggagactagag
gctggataccagatagcagtggagaccgagcaaatcggccaagagatgttggaaaacctg
agtcatgacagagaaaagatacaacgggcacgtgaccgactccgggaagcagatgcaaac
ctggggaagagctcccggattctgacggggatgttgcgaagaatcatccagaaccgtatc
ctgctcgtcatcttggggatcatcgtggtcatcgccatcctgacggccatcacatttttc
gtcagaggacactga
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