KEGG   Mus pahari (shrew mouse): 110323167
Entry
110323167         CDS       T05929                                 
Symbol
Kdm4a
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
mpah  Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mpah03036]
    110323167 (Kdm4a)
Enzymes [BR:mpah01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     110323167 (Kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     110323167 (Kdm4a)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110323167 (Kdm4a)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD Tudor_5 53-BP1_Tudor LBR_tudor DUF4537
Other DBs
NCBI-GeneID: 110323167
NCBI-ProteinID: XP_021055960
Ensembl: MGP_PahariEiJ_G0028701
LinkDB
Position
6:complement(69291090..69338530)
AA seq 1063 aa
MASESETLNPSARIMTFYPTMEEFQNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRTSYD
DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERK
YWKNLTFNPPIYGADVNGTLYEQHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYG
KQAVLCSCRKDMVKISMDVFVRRFQPERYKLWKAGKDSTVIDHTLPTPEAAEFLKDSGLT
PRAGSEECPEEDAEAVEQGEEGDVKRSLAKHRIGTKRHRVCLEIPQEVSQSELFPKEELS
SGQYEMTECPATLAPVRPTHSSVRQVEDSLPFPDYSDPTEVKFEELKNVKLEEEDEEDEP
EAAALDLSVNPAPVGGRLVFSGSKKKSSSSLGSSSSQDSVSSDSETAESVSCQGQETTGV
LTVHSYARGDGKAATGEPSVKKKRSAPRSISEQELAEVADEYMFSLEENKKTKGRRQPLS
KLPRHHPLVLQECGSDDETSEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEFNEIM
AQQAPHCAVCMIFQTYHQVEFGAFSQNCGNASEPAAQTQRTKPLIPEMCFTTTGCSTDIN
LSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAKASEEWMCSRCSANALEEDCCLCSLR
GGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNA
GCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHKIPNLERAKGALLSITA
GQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQLGPPAEGE
VVQVRWTDGQVYGAKFVASHPIQMYQVEFEDGSQLVVKRDDVYTLDEELPKRVKSRLSVA
SDMRFNEIFTEKEVKQEKKRQRVINSRYREDYIEPALYRAIME
NT seq 3192 nt   +upstreamnt  +downstreamnt
atggcttctgaatcagaaactttgaaccccagtgctcggatcatgaccttttaccccacc
atggaagagttccagaacttcagccgctacattgcctacattgaatcccaaggagctcat
cgggctgggctagccaaggtcgttcctcccaaagagtggaaacctcgaacatcctacgat
gatattgatgatctagtcatccctgcgcccatccagcagctggtgactggccagtctggc
ctcttcactcagtacaacatacagaagaaagccatgactgttcgtgagttccgcaagatc
gccaatagcgacaagtactgtaccccacgatacagtgaatttgaagaacttgagcgtaaa
tactggaaaaacctcacattcaatcctcccatctatggagccgatgtgaatggtactctc
tatgaacagcatgttgatgagtggaatatcggccggctgaagactatcctggacctggtg
gagaaggagagtgggatcaccattgagggggtgaataccccctatctgtactttggcatg
tggaagacgtcctttgcctggcacacggaggacatggatctatacagcatcaactatctg
cacttcggagagcccaagtcttggtactctgtcccacctgagcacgggaaacgcctggag
cgtcttgccaaaggctttttcccaggaagtgctcaaagctgtgaggcttttctccgccac
aagatgaccctgatctccccattaatgctgaagaagtacggcatcccctttgacaaggtg
acccaagaagctggagagtttatgatcacttttccatatggttaccatgctggcttcaac
catggcttcaactgtgcagagtccaccaattttgctacccgtcggtggattgagtatggc
aagcaggctgtgctgtgctcctgcagaaaagatatggtgaagatttccatggatgtgttc
gtgaggaggttccagccagaacgctacaaactttggaaagccggaaaggacagcacggtt
attgaccacacgctgcccacaccggaagcagctgagtttctgaaggacagcggactaacc
ccgagagcagggagtgaggagtgcccagaggaggacgcagaagcagtggagcagggagag
gagggggatgtgaagagaagcctggccaagcaccggatagggacaaagagacacagagtc
tgtctggaaataccacaggaggtcagtcagagtgagctcttccccaaggaagaactgagt
tctggacagtatgagatgacagagtgcccggccaccctcgccccggtgaggcccacccac
agctccgtgcggcaagttgaggacagtcttcccttcccagattactctgaccccactgaa
gtcaagtttgaagagctgaagaatgtcaaactagaagaggaagatgaggaggatgagccc
gaagcagccgctctggacctttcagtgaatcctgcgcctgtaggaggacgcctcgtcttc
tcgggttccaaaaagaaatcctcttccagcctgggctccagttcatctcaggattcagtt
tcttcagattccgaaaccgccgagtctgtctcttgtcagggccaagagacaacgggagtt
ctcactgtgcacagctatgccagaggggacggcaaggctgccacaggagagccgagcgtg
aagaagaagcgcagtgccccccgcagcatcagcgagcaggagctggcagaggttgcagat
gagtacatgttttccctggaggagaataagaagaccaagggtcgccgccagcccttgagc
aagctcccacgccaccacccactcgtgctgcaggagtgcggcagcgatgacgagacttct
gagcagctgacccccgaggaagaggctgaggagacagaggcttgggccaagcctctgagc
cagctgtggcagaaccgacccccgaactttgaggctgaaaaggaattcaatgagatcatg
gcccaacaggcccctcactgcgctgtgtgtatgatcttccagacctaccaccaggtggaa
tttggagccttcagtcagaactgtgggaatgcttcagagccagctgcccagactcagagg
actaagccattgatccccgaaatgtgcttcaccacaactggctgcagcacagacatcaat
ctgtccaccccttacctagaggaggatggcaccagcatgctagtgtcctgcaagaagtgc
agtgtccgggtccacgccagttgctatggcgtccctcctgccaaggcttctgaagaatgg
atgtgctctcgatgttcagccaatgccctggaggaagactgctgtttatgctcgttgcgt
ggaggggccctgcagagagcaaacgacgacagatgggttcatgtttcatgtgcggtggca
attctagaagcaaggtttgtcaacattgctgaaagaagtccagtggatgtgagcaaaatc
cctctgccccgcttcaaactgaagtgtgtcttttgtaagaagcggagaaaacggaatgcc
ggctgctgtgtgcagtgctcccacggccgctgccccactgccttccacgtgagctgtgcc
caggctgcaggggtgatgatgcagcccgacgactggccctttgtggtcttcatcacgtgc
ttccgccacaagattcccaatctggagcgtgctaagggagccttgctgagcatcacggcg
ggccagaaggtcatcagcaaacacaagaacgggcgcttctaccagtgcgaggtggtcaga
ctcaccaccgagaccttctacgaagtcaactttgacgacggctccttcagtgacaacctt
tatcctgaggacatagtgagtcaggactgtctccaactggggcctcctgctgaaggtgaa
gtggttcaagtcagatggacagatggccaagtctatggggctaagtttgtggcctcccac
cccatccagatgtaccaggtggagtttgaggatggctcacagctggtggttaagagagat
gatgtatacacactggatgaagagcttcccaagagagtcaagtctagactgtcggtagct
tcggacatgcgcttcaatgagattttcacagagaaggaagtaaagcaagagaagaaaagg
cagcgggtcatcaactcgaggtaccgggaggactacatcgagcccgcactgtaccgggcc
atcatggagtag

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