Mus pahari (shrew mouse): 110325611
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Entry
110325611 CDS
T05929
Symbol
Hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110325611 (Hps1)
Membrane trafficking [BR:
mpah04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
110325611 (Hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
Motif
Other DBs
NCBI-GeneID:
110325611
NCBI-ProteinID:
XP_021059372
Ensembl:
MGP_PahariEiJ_G0014467
LinkDB
All DBs
Position
1:complement(154172143..154198183)
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AA seq
714 aa
AA seq
DB search
MKCVLVATEGAEVLFYWTDEEFAESLRLKLRQSENEEEEELPVLEDQLSTLLAPVIISSM
TMLEKLSDTYTCFSTENDNHLYVLHLFGECLFIAINGDHSENEGDLRRKLCVLKYLFEVH
FGLVTVDGQLIRKELRPPDLEQRARVWKHFQRLLGTYSHLRDQEQSFAVEAVERLIHPQL
CEQSIETLERHVVQAINASPERGGEEVLHAFLLVHCKLLAFYSSHGASTLRPPDLLALIL
LVQDLQPSPGTTEEEEDDSDGPQVPEHKENRGTFKRPMSSQNIPVQQARSQNTSVPTRSS
EETDTDSISLPEEYFTPAPSPGEQSSGSLVWLDGDTPPSNALQMAEDTPEGLAPHSPERP
SPRRIFLDANIKENYCPLVPHTMYCLPLWPGINMVLLTKSPNTPLALILYQLLDGFSLLE
KKLKEGQEAGSALRSQPFVADLRQKMDKFIKNRVGQEIQNTWLEFKSKAFSKSEPGSSWE
LLQVCGKLKRQLCVIYRLSFLATAPSRGGPHLPQHLQDRAQKLMKERLLDWKDFLLVKSR
RNVTMVSYLEDFPGLVHFIYVDRTSGQMVAPSLSPNEKMSSELGKGPLAAFVKAKVWALV
RLARRYLQKGCTTLLFQEGDFRCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGVLGGDYY
RKLLRYYSRSHPSEPIRCYELLTLHLSVIPTDLLVQQASQLARRLGEASRVTLP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcgtgttggtggccaccgagggcgcagaggtcctcttctactggacagatgag
gagtttgccgagagcctccggctgaagctcaggcagtcagagaatgaggaggaggaagag
ctccctgtgctggaggaccagctcagtaccctcctggccccagtcatcatctcctccatg
acaatgttggagaagctctcagacacgtacacctgcttctcaacagaaaatgacaaccac
ctgtatgtcctgcatctgtttggagagtgcctgttcatcgccatcaacggagaccacagt
gagaacgagggggacctgcggaggaagctgtgcgtgctcaagtacctattcgaggtgcac
ttcggtttggtaactgtggatggccagctcatccggaaggagcttcgtccacccgacctg
gaacagcgtgcccgggtatggaagcactttcagagactgctggggacctacagccacctg
cgggaccaggagcagagctttgctgtagaggcagtggagcggctcattcacccccagctc
tgcgaacagagcatcgagacattagagcgacacgtggttcaagccatcaacgccagcccc
gagcggggcggcgaggaggtcctacacgccttcctgctggtacactgcaagctgttggct
ttctactccagccatggtgcgagcaccctacgccccccagatctcctggctctcatcctt
ctggttcaggacctccagccctccccaggcaccacagaagaagaggaggatgatagcgac
ggccctcaggtcccggagcacaaggagaacagggggacatttaagagaccaatgagcagc
caaaacatccctgtgcagcaggcgaggagccagaacacctcagtccccaccaggagttcc
gaggagacagacacagacagcatctccctccctgaagagtacttcactcctgcaccttcc
ccaggcgagcagagctcaggtagcctcgtctggctggatggtgacaccccgcccagcaat
gctcttcagatggctgaggacacccccgaggggctggcgcctcactccccagaacgtccc
agccccagaaggatcttcctggatgccaacataaaagaaaactactgtcccttagtgcca
cacaccatgtactgcctgcccctgtggccaggcatcaacatggtactgctgaccaagagc
ccaaacaccccactggccctgatcctgtaccaactgctggatggtttctccctactggag
aagaagctgaaggaaggtcaggaggccggaagtgccctgcggtcccagccctttgttgca
gaccttcgccagaagatggacaagtttatcaagaatcgagttgggcaggagattcagaac
acctggctggagtttaagagcaaagccttttctaaaagtgagccaggatcgtcctgggag
ctgctccaggtctgtggaaagctaaagcgacagctgtgtgtcatctaccgccttagcttc
ctggccactgcgcccagcaggggaggaccgcacctgccccagcacctgcaggaccgagcc
cagaaacttatgaaggagcggcttctggactggaaggacttcctgttggtgaagagccgg
agaaatgtcaccatggtgtcctacctggaggatttcccaggcctggtccacttcatctat
gtggaccgtacatccgggcagatggtggctccctctctcagccccaacgaaaagatgtct
tccgagttgggcaaggggcccctggctgccttcgtcaaagccaaggtctgggctctggtc
cgactggcgcgcaggtacctgcagaagggctgcaccacactgctgttccaggaaggggac
ttccgctgctcctacttcctgtggttcgagaatgacatgggatacaaactgcagatgatc
gaggtgcccgtcctttcagatgactcggtccccattggagtgctgggaggtgactactac
aggaaacttctgcgctactacagcaggagccacccctcagagcccatcaggtgttacgag
ctgctcacgttgcatctgtccgtcatccccacggacctgctggtgcagcaggccagccag
ctggcccggcgcctgggggaggcctcccgggtgaccctgccctag
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