Mus pahari (shrew mouse): 110336315
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Entry
110336315 CDS
T05929
Symbol
Arhgef1
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04270
Vascular smooth muscle contraction
mpah04611
Platelet activation
mpah04810
Regulation of actin cytoskeleton
mpah04928
Parathyroid hormone synthesis, secretion and action
mpah05135
Yersinia infection
mpah05163
Human cytomegalovirus infection
mpah05200
Pathways in cancer
mpah05205
Proteoglycans in cancer
mpah05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110336315 (Arhgef1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
110336315 (Arhgef1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
110336315 (Arhgef1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
110336315 (Arhgef1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110336315 (Arhgef1)
05205 Proteoglycans in cancer
110336315 (Arhgef1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
110336315 (Arhgef1)
09171 Infectious disease: bacterial
05135 Yersinia infection
110336315 (Arhgef1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110336315 (Arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110336315 (Arhgef1)
Membrane trafficking [BR:
mpah04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110336315 (Arhgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
AbiJ_NTD3
SET_assoc
Motif
Other DBs
NCBI-GeneID:
110336315
NCBI-ProteinID:
XP_021074433
Ensembl:
MGP_PahariEiJ_G0021204
LinkDB
All DBs
Position
19:20411197..20433126
Genome browser
AA seq
916 aa
AA seq
DB search
MGEVAGGAAPGPPRSGLVSIIIGAEDEDFENELEANSEDQNSQFQSLEQVKRRPAHLMAL
LQHVALQFEPGPLLCCLHADMLSSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFEL
DRTRPDLISEDVQRRFIQEVVQSQQAAVIRQLEDFRSKRLMGMTPWEQELSLLEPWIGKD
RGNFEARERHVAERLLSNLEEIQHTISTDEEKSAAVVTAISLYMRHLGVRTKSGDKKSGR
NFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNRGEPSAPDCRHLKVEADAEKPGPADRK
GGLGMSSRDRTIGTSGQDNPGVSLHPLPVDSVDSREPGVDTLQEPGDTPPQGPTSLEPLA
PPESTEDNGETESPEPGDDGEPGRSGLELEPEEPPGWRELVPPDTLLSLPKSQVKRQEVI
SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLDELQNIFPSLDELIEVHSLFLDRLMKR
RQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQ
EAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEESEERGKVELAAECCREILHH
VNQAVRDMEDLLRLKDYQRRLDLTHIRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKD
KAIEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD
HKAFYVIFTWDQEAQIYELVAQTSSERKNWCALITDTAGSLKVPAPASRLKPRPSPSCTR
EPLLSSSENGTGGAEMTPVDARTERILNDLLPFCRPGPEGQLAATALQKVLSLKQILLST
EEDSGAGPPRDGDGVPGGGAPGPAHTQEAHTQEVEENLLSLEVAIRQLEELEEEFCRLRP
LLSQLGGXSVPQPGCT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtcgccggaggggcggccccagggcctccccggtctggcctggtgtccatc
atcatcggggcggaggatgaggattttgagaacgagctggaggcgaactcagaagatcaa
aacagccagttccagagcctggagcaagtgaagcgccgcccagcccacctcatggccctc
ctgcagcacgtggccctgcagtttgagccaggaccgctgctctgctgcctgcacgcagac
atgctgagctctctgggccccaaagaagctaagaaggccttcctcgacttctatcacagt
ttcctggagaagactgcggttctccgggtgccggtccctcccaatgtcgcttttgaactt
gatcgtactcggcctgacctcatctctgaggatgtccagaggcggttcatacaagaggtg
gtgcagagccagcaggcagccgtgatccgtcagctagaggacttccgctccaagcggctc
atgggcatgacgccctgggaacaggaactgagcctgctggagccctggattgggaaagac
cgtggcaactttgaggcccgggagcggcatgttgcggagcggctgctgtccaacctggag
gagatccagcataccatctctacagatgaagagaaaagtgccgctgtggtcactgccatc
agcctgtatatgcgccaccttggggtccggaccaagagtggggacaagaagtcgggaagg
aacttcttccggaaaaaggtgatggggaatcggaggtcagatgaacccccaaagacaaag
aaagggctgagcagtatcctagatcctgcacgttggaaccggggagagccatctgctcca
gattgtcgacatctaaaggtggaggctgatgcagagaagccaggccctgcagaccggaag
ggaggcctggggatgtcttctcgggacaggactattgggacttcggggcaggacaaccca
ggagtctccctgcaccctctgcctgtagacagcgtggactcccgggaaccaggtgtggat
accctgcaggaaccaggggatacacccccacagggccctaccagcctggagcccctggcg
cccccagagagcacagaggacaatggcgagactgagagccccgagcccggagatgatggg
gagccaggacggtcaggcctggaactggaaccagaagaacctcctgggtggagggaactc
gtgcctccagacaccctgctcagtctgcccaagagccaagtgaagcggcaagaggtcatc
agcgagctgctggtaacggaggcagctcacgtgcgcatgctacgggtactgcatgacctc
ttctaccagcccatggcggatggaggcttcttccctctggacgagctgcagaacatcttc
cccagcctggatgagctcatcgaggtgcactccctgttccttgatcgcttgatgaagcgg
agacaagagagtggctacctcattgaggagatcggagatgtgctactggcccggttcgat
ggtgctgagggctcgtggttccagaagatctcctcccgcttctgcagccgccagtcattc
gctctagagcagctcaaagccaagcagcgcaaggagcctcgattctgtgcctttgtgcag
gaagctgagagccgtccacgatgccggcgcctacagttaaaggacatgatccccaccgag
atgcagcgactgaccaagtacccactgctgctacagagcatcgggcagaacacagaagag
tctgaagaacgggggaaagtggagcttgcagctgagtgctgccgggagattctgcatcat
gtcaaccaagccgtccgtgacatggaggacctgctgcggctcaaggattaccagcggcgc
ctggacttgactcacatacggcagagcagtgaccctatgctgagcgagttcaagaacctg
gacatcactaagaagaagttggtccatgaaggccccctcacgtggcgagtgactaaagac
aaagctatagaggtgcacgtgctcttgctggacgacctgctgctgctgctccagcgccag
gacgagaggctgctgctcaagtcccacagtcggacgctgacacccacacccgacggcaag
accatgctgcggccggtgctccggctcacctctgccatgacccgagaggtggccactgat
cacaaagctttctacgtcatttttacctgggaccaggaggcccagatatatgagctggtg
gcacagacgtcgtcagaacgcaaaaactggtgtgccctcattactgatactgctggatcc
ctgaaggtccctgcccctgcctcccgcctcaaaccccggcccagcccaagctgcacccga
gaacccctgctcagcagctctgagaatggcactggaggcgcagagatgactccagtcgat
gccaggacagagcggatcctcaacgacctcctgcccttctgcagaccaggcccagagggc
cagcttgctgccacagcccttcagaaagtactgtccctgaagcagatcctgttaagcact
gaggaagacagtggagcggggcctccccgtgatggggatggggtgcctggtggtggggcc
cccggcccagcgcatacccaggaagcacatacccaggaggttgaggaaaacctgcttagc
ctagaagtggccatcagacaactggaggagttggaagaggaattttgtcgcctaagaccc
ctcctgtctcagcttggggggnactctgtcccccaacctggctgcacctga
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