Methanocella paludicola: MCP_1961
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Entry
MCP_1961 CDS
T01142
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K16792
methanogen homoaconitase large subunit [EC:
4.2.1.114
]
Organism
mpd
Methanocella paludicola
Pathway
mpd00300
Lysine biosynthesis
mpd00680
Methane metabolism
mpd01100
Metabolic pathways
mpd01110
Biosynthesis of secondary metabolites
mpd01120
Microbial metabolism in diverse environments
mpd01210
2-Oxocarboxylic acid metabolism
mpd01230
Biosynthesis of amino acids
mpd01240
Biosynthesis of cofactors
Module
mpd_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MCP_1961
09105 Amino acid metabolism
00300 Lysine biosynthesis
MCP_1961
Enzymes [BR:
mpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
MCP_1961
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
BAI62033
NITE:
MCP_1961
UniProt:
D1Z011
LinkDB
All DBs
Position
1969142..1970380
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AA seq
412 aa
AA seq
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MGTITEEILGRASGKKAHAGDFIIARVDYAMSHDGTSVLAVKAFKDMLVEKVWDPGRIII
PFDHLAPANNETTALLQKELREWAAAQKISHLYDVGEGICHQVMAEKGFALPGKVIVGAD
SHSCTYGAFGAFGTGVGATDMAEIYASGKLWFRVPETIEVTVDGRFPKGVTAKDITLRII
KDIKTDGAAYKALEFYGTTIEAMSMSGRMTLCNMAIEMGAKAGIVPPDAKTGAYLKDRSA
EPYSPVIANDPTYCDSYHFDSNISPQVACPIDVDNVHDIEEVEGTHVDQVLIGSCTNGRL
EDLESAASILKGRKVKCRTLVIPASRSVMLEAVNSGIAATLLSAGATICNPGCGPCLGGH
MGVMAEGEACMSTTNRNFKGRMGKGADVYLGSPLTAAATAVEGKIADPRRYL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
gtggggacgatcactgaagaaatactcgggcgagcctcagggaaaaaggctcatgccggc
gatttcattattgcaagggtagattatgccatgagccacgacggcacgtcggtgctggcg
gtcaaggcctttaaggatatgctggtagagaaggtctgggaccccggccggatcattatt
ccttttgaccatctggcgcctgccaacaatgagacgacggcgctgcttcagaaggagctt
cgtgagtgggcggctgctcagaagatatcgcatttatatgatgtgggcgagggcatctgc
caccaggtcatggctgagaagggctttgctctaccggggaaagtgatcgtgggcgccgac
tcgcactcgtgcacgtatggcgccttcggcgccttcggtacaggcgtcggcgccaccgac
atggcggaaatttatgcctcgggcaaactctggttccgcgtacccgagaccatcgaggtc
acagtggatggaaggttcccgaaaggtgtaacggccaaggatatcacgctccgcatcatc
aaggatatcaagaccgatggtgccgcttataaagcgctcgagttttatggtactaccatc
gaggcgatgtccatgtcgggccgcatgaccttatgcaacatggccattgaaatgggagct
aaggctggtatcgttcccccggacgcaaagaccggggcgtatctgaaagacaggtccgcc
gagccttattcgccggtcatcgcgaatgatcccacgtattgcgactcgtatcattttgac
tcaaacatttccccgcaggtcgcctgtccgatcgatgtagataacgtccacgatatcgag
gaggtcgagggcacgcatgtcgatcaggtgctcatcggctcctgcaccaatggccggctc
gaagaccttgaatcggccgcaagcatccttaaaggaaggaaggtcaaatgcaggacgctc
gttatccccgcttccagaagcgttatgctcgaagcggtcaattcaggcatcgccgctact
ttattatccgccggagccacgatctgtaatcccggctgcggcccctgcctgggcggccac
atgggcgtcatggccgaaggagaagcctgcatgtccacaacgaaccgtaatttcaaagga
cgcatgggcaaaggcgccgatgtatacctgggctcgccgctgaccgcggccgctactgcc
gtagaaggaaagatagcggacccgaggcggtacctatga
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