KEGG   Methanocella paludicola: MCP_2317
Entry
MCP_2317          CDS       T01142                                 
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mpd  Methanocella paludicola
Pathway
mpd03030  DNA replication
mpd03410  Base excision repair
mpd03420  Nucleotide excision repair
mpd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MCP_2317 (pcn)
   03410 Base excision repair
    MCP_2317 (pcn)
   03420 Nucleotide excision repair
    MCP_2317 (pcn)
   03430 Mismatch repair
    MCP_2317 (pcn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpd03032]
    MCP_2317 (pcn)
   03400 DNA repair and recombination proteins [BR:mpd03400]
    MCP_2317 (pcn)
DNA replication proteins [BR:mpd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MCP_2317 (pcn)
DNA repair and recombination proteins [BR:mpd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MCP_2317 (pcn)
   MMR (mismatch excision repair)
    Other MMR factors
     MCP_2317 (pcn)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MCP_2317 (pcn)
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 Stathmin
Other DBs
NCBI-ProteinID: BAI62389
NITE: MCP_2317
UniProt: D1Z117
LinkDB
Position
2272214..2272954
AA seq 246 aa
MFKAVINAEVLKDAIEAVSTLVDEAKFHITKDGISARAVDPANVAMVSFDLKAGAFESYN
ATDGEIGVDLTRMNDILGMTSKDDKIELNLNEETRKLEIRTGGLAYTLSLLDPTSIRKEP
KVPKLELPAKIVLNGAELKRAVKAAEKVSDHMALGVVDKTFYVEAEGDLDKVRLDIPESS
LISIQSTGNVRSLFSLDYLNDLAKSLGKAEKVSIDLGTDYPVNFTFNIAGGNGTVTYLLA
PRIESE
NT seq 741 nt   +upstreamnt  +downstreamnt
atgttcaaggcggtaatcaacgcagaggtcctgaaggacgccatcgaggccgtatccacg
ctggtcgacgaggccaagttccacatcaccaaggacggcatctccgccagggccgtagac
ccggcgaacgtcgccatggtatcgttcgacctgaaggctggcgccttcgagtcgtataac
gccacggacggcgagatcggcgtagacctgaccaggatgaacgacatcctgggcatgacc
tcgaaggacgataagatcgagctgaatctgaacgaagagacccgtaagctggagatccgc
accggcggcctggcatataccctgtcgttactggacccgacctctatccggaaggagccc
aaggtgccgaagctggaacttcccgcgaagatcgtgctgaacggcgccgagctcaagcgt
gccgtcaaggccgccgagaaggtatccgaccacatggcgctgggcgtcgtcgataagacg
ttctacgtcgaggccgagggcgacctggacaaggtccgcctggatatcccggagtcgagc
ctcatctctatccagtccaccggcaacgtgcgctcgctgttctcgctggattatttaaat
gatctggcgaagtccctgggcaaggccgagaaggtcagcatcgacctgggcacggactat
cccgttaatttcacgttcaacatcgccggcggcaacggtaccgttacgtacctgctggcg
ccccggattgaatctgaataa

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