Methanocella paludicola: MCP_2317
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Entry
MCP_2317 CDS
T01142
Symbol
pcn
Name
(GenBank) DNA polymerase sliding clamp
KO
K04802
proliferating cell nuclear antigen
Organism
mpd
Methanocella paludicola
Pathway
mpd03030
DNA replication
mpd03410
Base excision repair
mpd03420
Nucleotide excision repair
mpd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MCP_2317 (pcn)
03410 Base excision repair
MCP_2317 (pcn)
03420 Nucleotide excision repair
MCP_2317 (pcn)
03430 Mismatch repair
MCP_2317 (pcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpd03032
]
MCP_2317 (pcn)
03400 DNA repair and recombination proteins [BR:
mpd03400
]
MCP_2317 (pcn)
DNA replication proteins [BR:
mpd03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MCP_2317 (pcn)
DNA repair and recombination proteins [BR:
mpd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MCP_2317 (pcn)
MMR (mismatch excision repair)
Other MMR factors
MCP_2317 (pcn)
TLS (translesion DNA synthesis) factors
Other TLS factors
MCP_2317 (pcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
Stathmin
Motif
Other DBs
NCBI-ProteinID:
BAI62389
NITE:
MCP_2317
UniProt:
D1Z117
LinkDB
All DBs
Position
2272214..2272954
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AA seq
246 aa
AA seq
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MFKAVINAEVLKDAIEAVSTLVDEAKFHITKDGISARAVDPANVAMVSFDLKAGAFESYN
ATDGEIGVDLTRMNDILGMTSKDDKIELNLNEETRKLEIRTGGLAYTLSLLDPTSIRKEP
KVPKLELPAKIVLNGAELKRAVKAAEKVSDHMALGVVDKTFYVEAEGDLDKVRLDIPESS
LISIQSTGNVRSLFSLDYLNDLAKSLGKAEKVSIDLGTDYPVNFTFNIAGGNGTVTYLLA
PRIESE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggcggtaatcaacgcagaggtcctgaaggacgccatcgaggccgtatccacg
ctggtcgacgaggccaagttccacatcaccaaggacggcatctccgccagggccgtagac
ccggcgaacgtcgccatggtatcgttcgacctgaaggctggcgccttcgagtcgtataac
gccacggacggcgagatcggcgtagacctgaccaggatgaacgacatcctgggcatgacc
tcgaaggacgataagatcgagctgaatctgaacgaagagacccgtaagctggagatccgc
accggcggcctggcatataccctgtcgttactggacccgacctctatccggaaggagccc
aaggtgccgaagctggaacttcccgcgaagatcgtgctgaacggcgccgagctcaagcgt
gccgtcaaggccgccgagaaggtatccgaccacatggcgctgggcgtcgtcgataagacg
ttctacgtcgaggccgagggcgacctggacaaggtccgcctggatatcccggagtcgagc
ctcatctctatccagtccaccggcaacgtgcgctcgctgttctcgctggattatttaaat
gatctggcgaagtccctgggcaaggccgagaaggtcagcatcgacctgggcacggactat
cccgttaatttcacgttcaacatcgccggcggcaacggtaccgttacgtacctgctggcg
ccccggattgaatctgaataa
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integrated database retrieval system