KEGG   Microlunatus phosphovorus: MLP_04810Help
Entry
MLP_04810         CDS       T01535                                 

Gene name
ligD
Definition
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mph  Microlunatus phosphovorus
Pathway
mph03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    MLP_04810 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mph03400]
    MLP_04810 (ligD)
Enzymes [BR:mph01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MLP_04810 (ligD)
DNA repair and recombination proteins [BR:mph03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     MLP_04810 (ligD)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_ligase_OB_2 DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: BAK33495
UniProt: F5XJZ9
LinkDB All DBs
Position
complement(534656..537094)
Genome map
AA seq 812 aa AA seqDB search
MATAGSEQTVTVDGHAIKLTNLDKVLYPLTGTTKAEVIGYYAEIAAVMLPHLVDRPATRK
RWPDGVGDGTDSPTVFFNKNLARGTPDWVTRFTIAHRDHDNDYPVVNDLATLTWLGQLAA
LEIHVPQWRFGKDGQPRKPDRLVLDLDPGEGVSLDECAEVARWAKQILDDIGHLSVPVTS
GSKGIHLYAPLDGSLDAEQATEVARELAQALEADHPDEVTATMKRSLRAGKVFIDWSQNN
GAKTTVSPYSLRGRLHPWVAAPRTWEELAEPDLAQLDYTEVLERARNRPDPLAAFVTSAS
GISDPATADRLTTYRSMRDPAKTPEPVPATPPSGGSGDTFVIQEHHARRLHYDFRLEHDG
VLVSWAVPKGPPTDTGSNHLAVQTEDHPLEYATFAGDIPKGEYGGGHVKIWDSGTYELHK
WRDGKEVIVTLHGQPNGGLGGQARSYALIHTGGGSRQPEKNWLMHLMKEKPAYGGQEIPF
PAEVEAMLASPATPEEIRPAQDEYAYEMKWDGVRSIVSLAGHRVRMTSRRGRDDTAAYPD
LVSALTTIDVETAVLDGEIVVTDENGRPTFGLLQNRMNLTRPADIQHAVAAWPAQLMVFD
LLELNGRSLIREPYERRRELLEELLPEPVGGRVQVPPIFEGDLDAALETSRALRMEGVVA
KRHGSIYQPGRRSYTWRKIKYQQSQEVVIGGWRPGHGRREGGMGSLLLGIPDSEGLRYVG
RVGSGFNDHQLDEMDRLLAGLARHDSPLHGVPREDARDANWVEPELVGEVVYGELTGPGR
LRHPVWKGLRTDKSPDQVVWEGVDLEGISSES
NT seq 2439 nt NT seq  +upstreamnt  +downstreamnt
atggccactgcgggcagtgaacagacggtgaccgtcgacggtcacgcgatcaagctgacc
aatctcgacaaggtcctctatccgctgaccggcaccacgaaggccgaggtgatcggctac
tacgccgagatcgccgccgtgatgctcccgcacctggtcgaccggccggcaacccgcaaa
cgctggccggatggcgtcggcgacgggaccgacagccccacggtcttcttcaacaagaat
ctggcccgcgggaccccggactgggtgacccgcttcacgatcgcccatcgcgatcatgac
aacgactaccccgtggtcaacgacctcgccaccttgacctggctgggccagctcgccgct
ctggagatccacgtaccgcagtggcggttcggcaaggacgggcagccgcgcaaaccggac
cggctggtgctcgacctcgatcccggggagggggtcagtctcgacgaatgcgcggaggtc
gcccgatgggcgaagcagatcctcgacgacatcggccatctgtccgtacctgtgacgtcc
ggcagcaagggcatccatctgtatgcacccctggacggcagtctcgatgcggagcaggcg
accgaggttgcccgcgagctggcccaggcgctggaggcggatcaccccgacgaggtcacc
gcgaccatgaagcgctcgctgcgcgcaggcaaggtgttcatcgactggagccagaacaat
ggggccaagaccacggtctcgccctattcgctccgcggccgactgcatccgtgggtcgcc
gcgccgcggacctgggaggaactcgccgagccggatctcgcccagctcgactacaccgaa
gtgctcgaacgggcccgcaaccgacccgatccactcgcggccttcgtgacgtccgcttcc
ggtatctctgatcccgcgactgcagatcggctcacgacctatcgcagcatgcgcgacccg
gccaagacccctgagccggtgccggccaccccgcccagcggcggatccggggacaccttc
gtgatccaggagcatcacgcgcgacggctgcactacgacttccggctggagcacgacggg
gtcctggtcagctgggcggtgccgaaagggccgccgaccgacaccggcagcaaccatctg
gccgtccagaccgaggatcatccgctggaatacgccacgttcgccggtgacatcccgaag
ggcgagtacggcggtggacacgtgaagatctgggactccggcacctacgaactgcacaag
tggcgcgacggcaaggaagtcatcgtcactctgcacggccagccgaacggtggtcttggt
gggcaggcccgctcctacgccctgatccacaccggtggcggcagtcgccagccggaaaag
aactggctgatgcacctgatgaaggagaaacctgcctatggcgggcaggagatccccttc
cccgctgaggtcgaggcgatgctggccagtccggccacgccggaggagatccggccggcc
caggacgagtacgcgtacgagatgaagtgggacggggtccgctcgatcgtctccttggcc
ggccatcgggtccggatgaccagccggcgcggtcgcgacgacaccgccgcctatccggac
ctggtgtccgcactgaccaccatcgacgtggagactgccgtattggacggcgagatcgta
gtgaccgacgagaacggccgcccgaccttcgggctgctgcagaaccggatgaatctgacc
cggccggccgacatccagcacgcggtggctgcctggcccgcccagttgatggtgttcgac
ctgctcgagttgaacgggcgatccctgatccgcgagccgtacgagcgtcgccgtgaactg
ctcgaagagctgctccccgagcctgtcgggggccgggtccaggtgccaccgatcttcgag
ggcgatctcgatgccgctctggagaccagtcgagcgctgcggatggagggggtggtcgcc
aagcgacacggttcgatctatcagccgggtcgacgtagctacacctggcgcaagatcaag
taccagcagtcccaggaggtggtgatcggcggctggcggcccggtcacggccgccgcgag
ggtggcatgggctcgctgctgctcggcatcccagactcagagggactgcgctatgtcgga
cgggtcggctccgggttcaacgaccatcagctcgacgagatggaccggctgttggccggt
ctggcgcgtcacgacagcccgctgcacggcgtgccgcgagaggacgcgcgggacgccaac
tgggtcgagcccgagctggtcggcgaagtcgtctacggcgagctgaccggaccgggccgg
ctgcggcatccagtctggaagggactccgcacagacaaatcacccgaccaggtcgtctgg
gaaggcgtcgatctggagggcatcagctcggagagctga

DBGET integrated database retrieval system