Monomorium pharaonis (pharaoh ant): 105834876
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Entry
105834876 CDS
T05760
Name
(RefSeq) histone deacetylase Rpd3 isoform X2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03082
ATP-dependent chromatin remodeling
mpha03083
Polycomb repressive complex
mpha04213
Longevity regulating pathway - multiple species
mpha04330
Notch signaling pathway
mpha04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105834876
03083 Polycomb repressive complex
105834876
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105834876
04350 TGF-beta signaling pathway
105834876
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
105834876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpha03036
]
105834876
Enzymes [BR:
mpha01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105834876
Chromosome and associated proteins [BR:
mpha03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105834876
HDAC complexes
Sin3A-HDAC complex
105834876
BRAF-HDAC complex
105834876
REST complex
105834876
SHIP complex
105834876
MiDAC complex
105834876
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105834876
Heterochromatin formation proteins
Other heterochromatin formation proteins
105834876
Chromatin remodeling factors
NuRD complex
105834876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105834876
NCBI-ProteinID:
XP_012533151
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MAMQPLKNRVCYYYDNDIGNYYYGKGHPMKPHRIRMTHNLLLNYGIYKKMEIYRPHKVAA
EEMTKFHCDDYIRFLRSIRLDNVTEYSKQMQQFNVGEDCPVFEGLYEFCQLSAGGTVAAA
IKLNKKASDICINWSGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GIEEAFYTTDRVMTVSFHKYGEYFPGTGDLDDIGTGKGKYYAVNIPLRDGMNDESYESIF
IPVISKVMETFQPSVIVLQCGADSLTGDRLGCFNLTVRGHGKCVEFIKKYNLPFLMLGGG
GYTIRNVSRCWTYETSVAVGCEIANELPYNDYFEYFCPDFKLHISPSNILNQNTAEYLDK
IKTKVFENLRMLPHAPGIQVQVIPEDIIIEDLETEEKMIFDERLPQRDLDKRIQRENEYS
DSEDEGEGGRRDNRSFEGFTKRLCLEKNSKMDMDIMDVKKENIRSEMKENVKDEKVE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcagcctttaaaaaaccgcgtttgctactattatgataatgatatcggaaat
tattattatggcaaagggcatcctatgaagccacatcgtataaggatgacacataatcta
ctcttgaactatggaatttataagaagatggagatatatcgacctcataaagttgcagcc
gaagaaatgacaaaatttcattgtgatgactatatcagatttttaagatctatacggcta
gacaacgtgacagagtatagcaaacaaatgcaacaatttaacgtaggagaagattgtcct
gtctttgaaggcttgtacgaattttgtcaattatcagctggtggaactgtagctgctgct
ataaaactcaacaagaaagcctcagatatctgcattaattggagcggtggcttacatcat
gcaaaaaagagcgaagcttctggtttttgctatgtaaatgatattgtacttggaatcttg
gaattgctaaaatatcatcaaagagttttgtacattgacattgatgttcatcatggtgat
ggtatagaagaagctttttatacaacggatagagtgatgactgtctcatttcacaagtat
ggtgaatacttccctggtacaggagaccttgatgatataggaacaggaaaaggaaagtac
tatgcagttaatatacctttaagggatggtatgaatgatgaaagctacgaatcaattttc
attcctgtcatctctaaagtgatggagacatttcaaccttctgttattgttttacagtgt
ggagcagattcattgacaggcgatcgattgggatgtttcaatttaactgtgagaggccac
ggcaaatgtgtagagtttataaaaaaatataatttaccttttttgatgctgggaggtggt
ggttacactataagaaatgtgtccagatgttggacatatgagacatcagtggctgttgga
tgtgaaattgctaatgagcttccatataatgattactttgaatatttctgtcctgacttt
aaattgcacattagtccttcaaatatattgaatcaaaacactgccgaataccttgacaaa
attaaaacaaaggtgtttgaaaatttgagaatgttacctcatgcacctggcatacaagtt
caggtaataccagaggatatcattattgaagatttagaaactgaagaaaagatgattttt
gatgaaagattgcctcaacgtgatttagataaaaggatacaacgtgaaaatgagtatagc
gatagtgaagatgagggtgaaggagggcgaagagataacagatcgtttgaggggtttacg
aagaggctgtgtttggaaaaaaattcaaaaatggatatggatattatggatgtaaagaaa
gagaatataagatcagagatgaaagaaaatgtgaaggatgaaaaagttgaataa
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integrated database retrieval system
