KEGG   Monomorium pharaonis (pharaoh ant): 105837009Help
Entry
105837009         CDS       T05760                                 

Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
mpha  Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:mpha00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mpha01009]
    105837009
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpha03019]
    105837009
   04131 Membrane trafficking [BR:mpha04131]
    105837009
   03036 Chromosome and associated proteins [BR:mpha03036]
    105837009
Enzymes [BR:mpha01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105837009
Protein phosphatases and associated proteins [BR:mpha01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105837009
Messenger RNA biogenesis [BR:mpha03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     105837009
Membrane trafficking [BR:mpha04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    105837009
Chromosome and associated proteins [BR:mpha03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     105837009
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var
Motif
Other DBs
NCBI-GeneID: 105837009
NCBI-ProteinID: XP_012536907
LinkDB All DBs
Position
Unknown
AA seq 1172 aa AA seqDB search
MTDSKVNLDLFTAAKQLADSEIELIKVIENSSKSQTTATNMLTANTKKTKKSGKSKNARP
SAALLAAKQEAAKRQLLSDKKSNSSFIPDIYQRVIDAYKMTRKETGLVFDRSMAEHECLW
DPNYPECPARFTRVLQRCEELGLVQRCKYVEPRRATESELLSKHSQKQIDILKATDSCTD
TENLELVSSKYDCVYIHPSTYRLSLLAVGSTINLVESVCKGEIQNGMAIIRPPGHHAMKS
EYCGYCFFNNVALAAEKALSSGLANKILIVDWDVHHGQATQQMFYSDPRVVYFSIHRYEH
GEFWPNLRESNFHYVGEDLGEGYNFNVPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLII
VSAGYDAALGCPEGEMLITPACYSHLLSSLLSLANGKVAVILEGGYCLKSLAEGAALTLR
ALLGDPCPLLQTLDLPSSSIRDTILNVIYAHKPYWKCYQYQDTHSINSVTHNKEELANRH
VVTVMYKGSEVKPDKYDTRNCYPVQSKETLETVDKKLNQLIQLTSLRKAPHKVCIVYDET
MQKHCNVFDNTHPEKPSRISNIYKNHEEHGVLQRCHLLQGRSATIEELSLVHSKDYIDDI
KSTSSLKLKELQKQASDYNSVYLHTETWLSACVSAGSLLQVVDAVLNGECQSGVAIVRPP
GHHAEKDIACGFCIFNNIAVAAMYAVQFHHVKRVLIVDWDVHHGNGTQSIFEEDPRILYI
SVHRYDNGSFFPNSKLANYTNVGLNAGEGFNVNIPWNKKGMGNSEYIAAFQQVVMPIAYQ
FNPELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLSSLANGRIILSLEGGYNINSISH
AMTMCTKALLGDPLPMLDSGLIPCTSAINSINNVLKTHKKFWSNLQYGMSLPKERLLPKL
KTIPNKLEEQGKNVDKPKQMEPKIALEEIESEKLELNLAIDKNRLNLVTDEEISKLTCEV
ENIKIKNFELHATKGEAVEARNSELEQSEVKNLDVSQSIQKCVNETNQPTGSQQENSNIH
EERDNEGAASSQRETQTTTLSEYLSDNLQALTAGEMFAIVPLQDCPHLFTVNEVPAGGID
VTAPCVECASTAENWICLQCYTVHCARSINQHAMQHAEEYEHPITLSFSDISVWCYGCEA
YIDNPRLYAARNAAHQSKFNEELPWTYNESRV
NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt
atgactgactccaaagtaaatctagatttgtttactgctgctaaacaactagcagacagt
gagattgagctgataaaagtgattgagaattccagcaagagtcaaacaactgctacaaac
atgctcactgcaaatacaaagaaaacaaaaaaatctggaaagtcaaaaaatgctcgtcca
tcggctgcgctgttagctgccaagcaagaggcagcaaaacgacagctactgtcagacaaa
aagtccaacagcagcttcataccagacatatatcaacgagtaattgacgcatataaaatg
acgaggaaggagactggtctcgtgttcgatcgaagcatggccgagcacgagtgtctctgg
gatccaaattatcctgagtgcccagctagattcacgcgagttttgcagagatgcgaggag
ctgggcctggtgcagcgatgtaagtacgtcgaaccgagacgtgccacagagagcgagctc
ttgagtaagcatagtcagaaacagattgatatcctaaaggcgacagacagctgtacggat
actgaaaacttggagctggtgtcgtccaagtacgactgtgtctacatccatccgtctacg
tatagattgtctttactagctgtgggctcaacgattaatttggtagagagtgtctgtaaa
ggcgaaatacaaaatggcatggctattattagaccacctggtcatcatgcaatgaaatca
gaatactgtggttattgctttttcaataacgtagctctagcagcggagaaagctttaagt
tctggtttggcgaataagattttaattgtagattgggatgttcatcacgggcaagcgaca
caacaaatgttttacagtgacccacgtgtagtttacttttcaatacatcgttatgagcat
ggtgaattctggcctaatttgagggaatctaactttcattatgttggggaagaccttggt
gagggttacaacttcaacgtacctttaaataaaaccggcatgactaatgctgactatatt
gcgatcttccagcaagttttattgccaatggcttacgaatttcaaccggatttaataata
gtatcggcgggttacgacgcggctctgggttgtccagagggtgaaatgttgataacacca
gcatgttactcacatttactatcgtcattattaagtctggcaaatgggaaagtcgccgtt
attttagaaggtggttattgcctgaaatcattggcagaaggtgcagcattgactttaaga
gctttattaggtgatccatgtccgcttttacaaacacttgatttaccatcgtcaagtata
cgcgatactattctgaatgtaatttacgcacataaaccatactggaaatgttatcaatac
caagacacgcacagcatcaatagtgtaacacacaataaagaggagcttgctaatcgacat
gtagtcactgttatgtacaaaggtagcgaagttaaaccggacaagtatgacacgcgaaat
tgttaccccgtacaaagcaaagaaacattagagactgtggataagaaattgaatcaactg
atacaactaacgagcttacgtaaagcacctcataaagtgtgtatcgtctacgatgagaca
atgcaaaagcactgtaacgtttttgataatactcatccggagaagccaagtcgcatttcc
aacatttacaagaaccacgaagaacacggcgtgttacaacgatgccacttgttacaagga
aggagcgcgacgatagaagaattgtccttggtccattcgaaggactacattgacgacatc
aaaagcacgtcgtctttgaaactcaaggaattgcagaagcaagcgtcggactacaattcc
gtttatcttcacactgaaacgtggttgagtgcctgtgtgtccgctggttccctgctgcaa
gtggtggacgcagttttaaatggcgagtgccaatccggagtagcgatcgtgaggccgccc
gggcaccacgccgaaaaggatattgcgtgtggtttttgtatatttaataacattgctgtg
gccgcgatgtacgccgtacagtttcatcacgtaaaaagagtattaatagtagattgggac
gtgcaccatggaaacggcacccaatctattttcgaggaagatccgaggattctctacatt
tcggttcatcgctacgataacgggagcttctttccgaattccaagctcgctaattatacg
aacgttggcttaaacgcaggcgagggatttaacgtgaacataccgtggaacaagaaggga
atgggaaattccgaatacatagcggccttccaacaagtcgttatgcccatcgcttatcaa
tttaatccagaattagttctggtttcggccggattcgacgcctgcattggtgacacgctc
ggaggttgtctcgtaagtccggaactctatggtcatttgacccattggctctcgtccctg
gccaatggccgtataatcctgagtcttgaaggaggttacaatatcaattccatctcccat
gccatgacgatgtgcaccaaggccctgttgggcgaccctctgccgatgcttgattccggt
cttattccttgcaccagcgcgatcaattctatcaataacgtactaaagactcacaagaag
ttctggtccaatctgcaatatggaatgtccttaccaaaagagaggctacttcccaaactc
aagacgattcctaataaacttgaggaacaaggaaaaaacgtggataaaccgaaacaaatg
gaaccaaagatagccttggaggaaatcgaaagcgagaaactcgagctaaacctggcgatc
gacaaaaaccgcttgaatctagtgacagacgaagaaatctcgaagctaacctgcgaagta
gagaatattaagataaaaaattttgaattgcatgcgacgaaaggtgaagcggtcgaggca
aggaattccgaactggagcagagcgaagtgaaaaatctggatgtttcgcaaagtatacaa
aaatgcgtgaatgagacgaaccaaccaacaggcagccagcaagaaaattctaacatacac
gaggaacgcgataacgagggtgcagcgtcttcacaacgtgagacgcaaaccacaacactc
tcggagtatctttctgacaatcttcaggctctgacagcaggagaaatgttcgcaattgtg
cccttgcaggactgtccgcatttgtttacagtcaatgaggttcctgctggtgggattgat
gtgactgcaccgtgtgtcgaatgtgccagcaccgcggagaattggatctgcttacagtgt
tacaccgtgcattgcgcccgcagtattaatcaacacgcgatgcagcacgcagaggagtac
gaacatcccatcacactcagcttcagcgatatttccgtctggtgttacggttgcgaagct
tatattgataatcctcgattatatgcggcaaggaacgcagctcatcaaagcaagttcaat
gaagagcttccctggacttataacgagagtagagtataa

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