KEGG   Pseudoduganella plicata: E1742_20025
Entry
E1742_20025       CDS       T06563                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mpli  Pseudoduganella plicata
Pathway
mpli03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mpli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E1742_20025 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mpli03400]
    E1742_20025 (xth)
Enzymes [BR:mpli01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     E1742_20025 (xth)
DNA repair and recombination proteins [BR:mpli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     E1742_20025 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: QBQ38203
UniProt: A0A4P7BIS2
LinkDB
Position
complement(4534636..4535406)
AA seq 256 aa
MPKIISANLNGIRSASKKGFFNWMATQSADFICVQELKAQAADMTEEFLNPHGYHGHFHY
AEKKGYSGTGIYSRLAPDAVKIGFGSPEFDAEGRYVRADFGDLTIISVYCPSGSSSPERQ
EAKFRFMELFLPHLAQLRAEGREVVICGDWNIAHKEIDLKNWKGNVKNSGFLPEERAWLT
RVFDEVGYVDVHRGLDPRPEQYTWWSNRGQAYAKNVGWRIDYHVATPGIAGCAQTVAVYK
DEKFSDHAPLIIDYAR
NT seq 771 nt   +upstreamnt  +downstreamnt
atgccaaaaatcatctccgccaacctgaatggaatccgctccgcttccaagaagggcttc
ttcaactggatggcgacacagtcggccgatttcatctgcgtgcaggagctcaaggcgcag
gccgccgacatgacggaagagttcctgaacccgcacggctaccacggccacttccactac
gcggaaaagaagggctactccggcaccggcatctacagcaggctggcgcctgacgcggtg
aagatcggtttcggcagtcccgagttcgacgcggaaggccgctacgtgcgcgccgacttc
ggcgacctgaccatcatctccgtctactgcccatccggctcgtcgtcgccggaacgccag
gaagcgaagttccgtttcatggaactgttcctgccgcacctggcacagctgcgtgcggag
ggccgcgaagtcgtcatctgcggcgactggaatatcgcgcacaaggaaatcgatctgaaa
aactggaagggcaacgtcaagaattccggcttcctgccggaagaacgggcgtggctgacg
cgcgtgttcgatgaagtgggctatgtggacgtgcaccgcggcctggatccccgacccgaa
cagtacacgtggtggagcaaccgcggccaggcttacgcgaagaacgtgggctggcgcatc
gactaccacgtcgccacgcccggcattgccggctgcgcgcagacggtagccgtctacaag
gacgagaagttctccgatcacgcaccgctgatcatcgactacgcccgctga

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