Marinobacter psychrophilus: ABA45_13050
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Entry
ABA45_13050 CDS
T03980
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mpq
Marinobacter psychrophilus
Brite
KEGG Orthology (KO) [BR:
mpq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpq03019
]
ABA45_13050
03009 Ribosome biogenesis [BR:
mpq03009
]
ABA45_13050
Messenger RNA biogenesis [BR:
mpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABA45_13050
Ribosome biogenesis [BR:
mpq03009
]
Eukaryotic type
Pre-60S particles
RNases
ABA45_13050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKO53227
UniProt:
A0A0H4IE34
LinkDB
All DBs
Position
complement(2898856..2899398)
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AA seq
180 aa
AA seq
DB search
MEKGNRLVWIDLEMTGLDPEQECIIEMATLVTDSELNLIAEGPVLAVHQSDTLMGAMDEW
CTRTHGESGLTQRVKDSRISEAEAEQQTLAFLREHLEPGDSPLCGNSIGQDRRFLVKYMP
QLEEFFHYRNLDVSTIKELARRWRPDVLDGVKKQGNHLALDDIRDSINELRHYREHFFKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagggcaatcgcctggtttggattgacttggaaatgacaggtctggatccggag
caggagtgcattattgaaatggctaccctggttaccgattccgaactcaatctgattgcc
gaaggcccggtgcttgcggtgcatcagtctgacactctgatgggcgcgatggacgaatgg
tgtacccgtacccacggtgaaagtggtctgacccaacgggtaaaagacagtcgtatcagc
gaagccgaagccgagcagcagaccctggcgtttttgcgcgaacacctggaaccgggtgat
tctcctttgtgcggcaacagtatcggccaagaccggcgctttttggtcaagtacatgccg
cagctagaagagttcttccattaccgcaatctggatgtgtctaccatcaaagagctggcg
cggcgttggcgtccggatgtgctggacggagtcaagaaacagggcaatcatctagcgctg
gatgatattcgcgattctattaacgagctgcgccattatcgcgagcatttttttaaactg
taa
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