KEGG   Marinobacter psychrophilus: ABA45_17125Help
Entry
ABA45_17125       CDS       T03980                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mpq  Marinobacter psychrophilus
Pathway
mpq03030  DNA replication
mpq03410  Base excision repair
mpq03420  Nucleotide excision repair
mpq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ABA45_17125
   03410 Base excision repair
    ABA45_17125
   03420 Nucleotide excision repair
    ABA45_17125
   03430 Mismatch repair
    ABA45_17125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpq03032]
    ABA45_17125
   03400 DNA repair and recombination proteins [BR:mpq03400]
    ABA45_17125
Enzymes [BR:mpq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ABA45_17125
    6.5.1.6  DNA ligase (ATP or NAD+)
     ABA45_17125
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ABA45_17125
DNA replication proteins [BR:mpq03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    ABA45_17125
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     ABA45_17125
DNA repair and recombination proteins [BR:mpq03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ABA45_17125
   NER (nucleotide excision repair)
    Other NER factors
     ABA45_17125
   MMR (mismatch exicision repair)
    Other MMR factors
     ABA45_17125
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_OB_2 DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID: AKO54435
UniProt: A0A0H4I9K5
LinkDB All DBs
Position
complement(3777417..3778274)
Genome map
AA seq 285 aa AA seqDB search
MKRLSSGLLASMALMTAGAIAAPASVPLANVYQQGAPLADYWVSEKLDGVRAYWDGERLW
SRRGNPFQAPDWFVSDFPPQPLDGELWLGRGHFAQLSGIVRTVRPVDADWRFVRFMVFDL
PLADQTFDQRLPQLRELVSQAGSPYLALVEQQRPGNHQQLMAHRDKVIAFGGEGLMLRRG
ASVYQAGRSDDLLKVKRFDDAEAIVVGILPGKGKYQGLMGALRVRLADNRELRIGSGFSD
AERIDPPPAGSVITFKYSGHTATGLPRFASFMRIRNDEPKAAAVP
NT seq 858 nt NT seq  +upstreamnt  +downstreamnt
atgaaacgcctgagttcaggcttattggcaagcatggcgctgatgaccgctggtgcaatc
gctgcgccagcaagcgttccgctggccaatgtgtatcagcaaggtgcgccgcttgcggat
tattgggtaagtgaaaaactggatggagtgcgggcttattgggacggtgaacgtctgtgg
tcccgccgcggtaatccgtttcaagcgcctgactggtttgtcagcgatttcccgccgcag
ccgttagacggcgagctgtggctggggcgcggccattttgcacaactttccggcattgtg
cgcaccgttcgtccagtagatgcggattggcgttttgtgcgttttatggtgttcgatttg
ccgttggccgaccagacatttgaccaacgtcttccgcagttgcgcgagttggtcagtcaa
gcgggttcaccctacctggccttggttgagcagcaacggcccggaaaccatcagcagctg
atggctcatcgggataaggtgattgctttcggtggagaagggctgatgctgcgccgtggc
gctagtgtctatcaggctggccgctcggacgacttgttgaaagtgaagcgctttgacgac
gctgaggcgatcgttgtgggcattctgccgggcaagggcaaatatcagggcttgatgggc
gcgctgcgggtgcggctggccgataaccgtgagcttcgcattggtagcggcttcagcgac
gctgagcgtatagacccaccgccggcgggaagtgttattaccttcaaatattccggccac
accgccaccggcctgccacggtttgccagttttatgcgaattcgaaatgatgaaccaaag
gcggcagctgtgccatag

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