Marinomonas primoryensis: MP3633_1035
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Entry
MP3633_1035 CDS
T06705
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpri
Marinomonas primoryensis
Pathway
mpri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MP3633_1035 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpri03400
]
MP3633_1035 (recD)
Enzymes [BR:
mpri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MP3633_1035 (recD)
DNA repair and recombination proteins [BR:
mpri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MP3633_1035 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
SH3_13
AAA_11
Helicase_RecD
UvrD-helicase
AAA_22
UvrD_C
AAA_16
AAA_17
Herpes_Helicase
nSTAND3
SLFN-g3_helicase
AAA_28
CbiA
AAA_29
AAA
AAA_24
NTPase_1
FtsK_SpoIIIE
SRP54
Motif
Other DBs
NCBI-ProteinID:
QKK79770
UniProt:
A0A859CZ45
LinkDB
All DBs
Position
KMM3633:1080383..1082308
Genome browser
AA seq
641 aa
AA seq
DB search
MDFSNQMGIFDQLTPSEDRLLENGSPAQVSLSTLQAKGVFRAIDCQWIEQLAQHAGENDH
SVWMAGALCSAYLGAGHICIDLATLWQMPPEGMSVDELRNALAAGGVNSVQAWCDALNAS
CLVATAPNLAERPMVLVGTRLYLYRYYQYEQQVLNYFKKQFDVAPFDVDAGLLAQLFPET
SETINWQKVSVANAASLPFSVISGGPGTGKTTTVTKLLALLVAQSFSQGKPLRIELAAPT
GKAAARLTESISSAKADLPLSDEIKQAIPEQASTLHRLLGSDFGRSRFKHNKDNPLHLDV
LLVDEVSMVDLPMMAKLIDAMPPHARLILLGDKDQLASVEAGSVLGDLSFGIENVYFRPE
WAARLAFVTGEDITPFGNALAPPISRALTLLRTSYRFHANSGIGHLAKAMNAGDAKGVLR
CLQSGRDDVHWCVPEEGQTKADIATLAKGYDDYWEAVRQKRGIAELYATFSRYQILTAVR
QGEFGVEKINAHLELYFYQRGRVKDPHVWYPGKAVMLTRNDAALGLFNGDIGLCMPDDSQ
RLRVWFMQPDGSFTGLLPSRLSEFEVVFAMTVHKSQGSEFDRVALLLPITASPVLTKELL
YTGITRAKKDVTLWGASSLIRNATHARIQRHSGLIEALWPN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggacttttctaatcaaatgggcatttttgatcaattaacaccgtcagaagatcgcttg
ctagaaaacggctccccagctcaagtgagtttgtcgacattgcaggcaaaaggtgtgttt
agagccattgattgtcagtggattgagcaactggctcagcatgctggtgaaaacgatcat
agtgtttggatggcaggggctttatgcagcgcgtatcttggtgcgggccatatttgtatt
gatttagcgacgctttggcaaatgccgccagaaggcatgagtgttgatgaattacgtaat
gctttggcagcgggcggcgtaaacagcgttcaggcttggtgtgacgcgttgaacgcgagt
tgtttagttgccacggcgccaaatttggcggagcgtcccatggtgttagtgggcacgcgt
ttgtatttgtatcgttattatcaatatgaacaacaggtattgaattatttcaaaaaacaa
tttgatgtcgctccgttcgatgttgacgcggggttactggctcagctttttccagagaca
tctgaaaccatcaattggcaaaaggtatcggtcgcgaacgctgcaagtttgcctttttcc
gtgatcagtggcggcccaggaacgggtaaaaccaccacggtaactaagttattggctttg
ctagtggcgcagtctttttcacaaggtaagcctttgcgtattgagttggcagcccctact
gggaaagcggcggcacggttaacggaatccatttccagtgctaaagcagatttaccgcta
agcgatgaaatcaagcaggcgattccagaacaagccagtaccttacatcgtttgttggga
agtgattttggccgtagtcgttttaaacataataaagacaaccctttacacctagatgtt
ctattggttgatgaggtttccatggtcgatttgccgatgatggcaaaacttattgatgcc
atgccgccccatgcacgcttgattttgttgggcgataaagatcagttagcgtcggtagaa
gcgggcagtgtgcttggggatttatcctttggtattgaaaatgtgtatttccgaccggaa
tgggcggcgcgtttggcgtttgtaacaggggaagatataacgccatttgggaacgcctta
gcgcctcctatcagccgggcgttaactttgttgcgcaccagttatcgatttcatgcaaac
agtggtattgggcatttggcaaaggcgatgaatgccggtgatgcaaaaggtgttttgcgt
tgtctgcaatcgggtcgcgatgatgttcattggtgcgtgcccgaggaagggcaaacgaaa
gcggatattgccaccttggcaaaaggctacgatgactattgggaagcggtgcgccagaag
cgtggtatcgcagaattgtatgcgactttttcacgttaccaaattctgacggcggtgcgt
cagggtgagtttggtgttgagaagatcaatgcgcatttggaactgtatttttatcaacga
ggtcgagtcaaagatccgcatgtttggtatccaggaaaagcggtgatgctcaccagaaac
gacgcggcattggggttgtttaatggtgatattggcttgtgcatgcctgacgactctcaa
cgacttcgggtttggtttatgcagcctgatggcagctttactggtttgttgccgagtcga
ctcagtgagtttgaagtggtgtttgcgatgacggtgcataagtcgcaaggctctgagttt
gaccgagttgctttattgttgccaataacagcttcaccagtattgaccaaagagttgctg
tataccggcatcacaagggctaaaaaagacgttactttatggggtgcgagcagtttgatt
cgcaatgcgacgcacgcacgcattcagcgccactcgggacttattgaggcgctttggcct
aattaa
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