Methylovulum psychrotolerans: CEK71_21915
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Entry
CEK71_21915 CDS
T04929
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpsy
Methylovulum psychrotolerans
Pathway
mpsy03420
Nucleotide excision repair
mpsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEK71_21915
03430 Mismatch repair
CEK71_21915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpsy03400
]
CEK71_21915
Enzymes [BR:
mpsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEK71_21915
DNA repair and recombination proteins [BR:
mpsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEK71_21915
MMR (mismatch excision repair)
Other MMR factors
CEK71_21915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
CarD_TRCF_RID
DUF4391
Motif
Other DBs
NCBI-ProteinID:
ASF48499
UniProt:
A0A1Z4C4P8
LinkDB
All DBs
Position
complement(4848242..4850419)
Genome browser
AA seq
725 aa
AA seq
DB search
MDVTTIIDPLNDAQRQAVTAPSKAMLILAGAGSGKTRVLVHRIAWQIEVEGLSPQSILAV
TFTNKAAREMRSRIETLLNVSAHSMWIGTFHGIAHRLLRRHAADAKLPDTFQVMDSADQL
RVIKRVLAALNYDEAKWPAKQVQWHINAQKDEGIRARHGLETGDVYQRTMLRIYRAYEEL
CDRSGLVDFAELLLRVHELWRDNPAILAHYQQRFQQVHVDEFQDTNTIQYAWLRLLTQES
NNLFVVGDDDQSIYGWRGAKIENIYGFQQHYPDHEVIKLEQNYRSTGNILSAANKIIANN
NGRMGKELWTEAGRGEPILLYTAFNEQDEAYFVVERIRAWAEAGNARNGCAILYRSNAQS
RQFEERLMQAAIPYRVYGGLRFFDRAEIKTALAYLRLLANRHDDASFERIINTPTRGIGA
KALDDIRALARSDNQSLWAAAIALLQSGQQAARAANALSGFLMLIKKLAEQAEPLPLHEK
VKVVLEKSGLRDYYAKDTANKGEEKVENLDELVNAARHFDLAVLPADEDNFSPLDRFLAH
AALESGDMQAEDFDDCVQLMTLHSAKGLEFKLVFLVGLEEGLFPSQQSVDDIARLEEERR
LCYVGITRAMEQLYITYSESRQLYGRESYPKPSRFLREIPADTIQEVRLRAQITRPVTTV
NVAAKPALLTESNHFQAGQTVRHEKFGVGRILQSEGEGKHERVQVKFAEGVKWLMLSYAK
LELVK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaacgacaatcatcgaccccttaaatgacgcgcaacgccaagccgtcactgcc
ccttccaaggccatgctaattttggcgggcgcgggtagcggcaaaacccgtgtgctagtc
caccgcattgcctggcagattgaagtggaaggcctgtcgccgcaaagcatcttggcggtg
acgtttactaataaggcggcgcgggaaatgcgcagccgtatcgaaaccctgctcaatgtc
tcggcgcacagcatgtggataggcaccttccacggcatagcccaccgcctgttgcgccgc
catgccgccgatgccaaactgcccgacacctttcaggtgatggacagcgccgaccaattg
cgggtcattaaacgggtgctggccgcattaaattatgatgaggccaaatggcccgccaaa
caagtgcaatggcatatcaatgcccaaaaagacgagggcatccgcgcccgccatggttta
gagaccggggacgtgtaccagcgcaccatgctgcggatttaccgcgcttacgaagagctg
tgcgaccgttccggcttggtcgattttgccgaactgttgttgcgcgtccatgaattatgg
cgcgataaccctgctattttggcacattatcaacaacgcttccagcaagtccacgttgat
gagtttcaagacaccaacaccatccaatacgcgtggctgcgcctgttgacccaagagagc
aataatctgtttgtggtcggcgacgacgaccaatccatttacggctggcgcggtgcgaaa
attgaaaacatttacggcttccagcagcattaccccgaccacgaagtcattaaactggaa
caaaattatcgctctacgggcaatatcctcagtgccgccaataagattatcgccaataac
aacgggcgcatgggcaaagagctatggacggaagccgggcgcggcgagcctatcctgtta
tataccgcctttaacgaacaggacgaggcgtattttgtcgtcgaacgcatccgcgcctgg
gcggaagcgggcaacgcccgcaacggttgcgctatattataccgttctaacgcccaatcc
cggcaatttgaagaacgcctgatgcaggccgccatcccctaccgggtctatggcggcctg
cgctttttcgaccgcgccgaaatcaaaaccgccttggcgtacttgcgcctgctcgccaac
cgccatgacgatgcctcgttcgagcggattatcaacacccccacgcgcggtatcggcgcg
aaagccttagacgacatccgcgccctggcgcgtagcgataaccaatcgctgtgggcggcg
gcgattgccttgctgcaaagcgggcaacaggcggcacgtgccgccaacgccctgagcggg
tttttaatgctgattaaaaaactcgccgaacaggccgaaccgttgccgctgcatgaaaag
gtcaaagtggttttggaaaaaagcggcctgcgggattattatgccaaagataccgccaat
aaaggcgaggaaaaagtcgaaaacttggatgagctggtcaacgccgcccgccattttgac
ttggcggtactgcccgccgatgaggataattttagccccttagatcggtttttggcccac
gcggccttagagtccggcgacatgcaggccgaggatttcgacgactgtgtgcaattgatg
accctgcattccgccaaaggcttggaatttaagctggtgtttctggtcgggctggaagaa
ggcctgttcccgtcgcaacaatctgttgatgatattgcccgcttagaagaagagcggcgc
ttgtgttatgtcggcatcacccgcgccatggaacagctttatatcacctacagcgaatcc
cgacagctctatggccgcgaaagctacccgaaaccgtcccggttcttgcgcgaaatccct
gccgataccatccaagaagtgcgcctgcgggcgcaaatcacccgcccggtgacgactgtc
aatgtcgctgctaaaccggctttattgactgaaagtaaccattttcaggctgggcagacc
gtgcgccatgaaaagtttggggttgggcggattttgcaaagtgagggcgaaggcaagcat
gagcgggtgcaggttaagtttgccgagggggttaagtggttgatgttgagttatgctaag
ttggagttggtgaagtag
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