Malassezia restricta: MRET_3016
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Entry
MRET_3016 CDS
T06113
Name
(RefSeq) poly(A) polymerase
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mrt
Malassezia restricta
Pathway
mrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MRET_3016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_3016
Enzymes [BR:
mrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MRET_3016
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
MRET_3016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Polbeta
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
38739782
NCBI-ProteinID:
XP_027485397
LinkDB
All DBs
Position
V:complement(join(302459..302551,302577..302655,302680..304298))
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AA seq
596 aa
AA seq
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MTAPTAFSHPRGRQVERMSTGVQMWGVTPPISLSGPTEKDLEITQALEEELRANNVFESS
EEAKLREVVLGRVDALVKEFVYRASIQHGLSENAARASGGKIFTFGSYRLGVHGPGSDID
TLCVAPKHVQREDFFEIFEALLKERDDVTEVAAVPEAYVPLIKTKFMGISIDFLFARIPL
PRIDDALELRDDNLLKNLDERDVRSLGGSRVTDEILRLVPNVHVFRLALRCIKLWAGRRA
IYANVLGFLGGVAWAMLVARICQLYPNEVAGAIVSRFFLILLQWKWPQPVLLKPIEDGPL
PIRVWNPRLYPTDRLHRMPIITPAYPSMCATHNVTQSTQMVMTQEFQRGSEIVDRIFLGK
ATWKELFEKHDFFHRYKYYLQVIASSGSADLQLKWEGTVESKLRQLIMKLELVPSLLIAH
PFVDGFNHECVCYTDEEVRQVATGEMPPEVAARSKLQDLPPEGEAAKVKDQETQDNASDR
RTVYTTTFYIGLKVEPRQAHETSVRRFDISYPTLDFTQRVKQWDQYDESAMGIVVRHIKG
SHLPDYVFEGDPRPRKGPSSKRAKNKHSDSATEDAAKKIKVSEAVPSTTPESGSTS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccacggctttctctcatccccgtggacgacaggtcgagcgaatgagcacg
ggcgtccagatgtggggcgtgacgccgcctatctcgctgagcgggccgacggaaaaggac
ttggagattacccaggcccttgaggaggagctgcgtgcgaataatgtgttcgagtcgtcg
gaagaggccaagctccgagaggtggtgctcggccgcgtcgatgcgcttgtcaaagagttt
gtgtaccgtgcatcgatccagcatggcctatcggagaacgcggcgcgtgcctcgggcggc
aaaatcttcacatttggctcctaccgactcggtgtgcatgggcccggctcggatatcgac
acgctgtgcgtcgctcccaagcacgtccagcgcgaagactttttcgagatcttcgaggcc
ctgttgaaggagcgcgatgacgtcacggaagtagcggcggtgccagaagcgtacgtcccg
ctgatcaaaaccaagtttatgggcatctcgatcgatttcctctttgcacgcattcccctg
ccgcgcatcgacgacgcactcgagctgcgcgatgataatctactcaagaacctcgatgag
cgcgacgtccgcagtcttggtggctcgcgtgtgacggacgaaattttgcgcctcgtgccc
aacgtgcatgtattccgcctggccctacgctgcatcaagctgtgggccggtcgacgcgct
atttatgccaacgtgctcggattcctcggtggtgttgcatgggccatgcttgtcgcgcgc
atctgccagctgtatccaaatgaagtggcgggtgcgattgtgagccgcttctttctcatc
ttgctgcagtggaagtggccccagcctgtgctgctcaagcctatcgaggacgggcccctg
cctattcgcgtatggaatccgcgactctacccgactgaccgacttcatcgcatgccgatc
atcacacctgcatacccatcgatgtgcgcgactcacaacgtcacacaatcgactcagatg
gtcatgacacaggagtttcagcggggtagcgagattgtcgaccgcatttttcttggcaag
gctacctggaaggaactttttgagaagcacgacttcttccacaggtacaagtactacctg
caggtcattgcctcgtccggctcggcggatctgcagctcaagtgggaaggcacggtcgag
tccaagctgcgtcagctcatcatgaaacttgagcttgttccctccctgctcattgctcac
ccattcgtcgacggattcaatcatgagtgcgtgtgctatacagatgaggaggtgagacag
gtagccacgggcgaaatgccgccagaggtcgccgctcgctccaagctacaggacctgccg
ccagaaggcgaggccgcgaaggtaaaggatcaggagacgcaagacaacgcctcagaccgg
cgaaccgtctacactaccaccttttacatcgggctcaaagtcgagccacggcaagcccat
gaaacgtccgttcgccgctttgatatctcgtatcctacgttggactttactcagcgcgtc
aagcagtgggaccagtacgacgagtcagctatgggcattgtcgtccgccatatcaaagga
tcccatttgcccgattacgtatttgagggagatccacgtccgaggaaagggccgtcgagc
aagcgggctaagaacaagcattcagattcggccacagaggacgctgcgaaaaaaatcaag
gtgtcggaggctgtgccttcgaccaccccagaatcgggttcgacgtcatag
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