KEGG   Micromonospora sagamiensis: GCM10017556_46170
Entry
GCM10017556_46170 CDS       T06946                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
msag  Micromonospora sagamiensis
Pathway
msag03030  DNA replication
msag03430  Mismatch repair
msag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCM10017556_46170 (dnaE)
   03430 Mismatch repair
    GCM10017556_46170 (dnaE)
   03440 Homologous recombination
    GCM10017556_46170 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msag03032]
    GCM10017556_46170 (dnaE)
   03400 DNA repair and recombination proteins [BR:msag03400]
    GCM10017556_46170 (dnaE)
Enzymes [BR:msag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GCM10017556_46170 (dnaE)
DNA replication proteins [BR:msag03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GCM10017556_46170 (dnaE)
DNA repair and recombination proteins [BR:msag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GCM10017556_46170 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: BCL16878
LinkDB
Position
5241265..5244795
AA seq 1176 aa
MADSFAHLHVHTEYSMLDGAARLKDLFAEASRLGMPAVAMTDHGNMHGAHDFYKQAMAAG
ITPVLGIEAYVAPESRFHKQRVKWGRPEQKSDDVSGSGGYTHKTIWARNRTGLHNLFTLT
SKAYTEGFFVKWPRMDTELIAAHAEGLMATTGCPSGEVQIRLRLGQDAQALEAAAKYQEI
FGRENYFLELMDHGLDIEKRVRDGLLEIGKKLAIPPVVTNDSHYTHEAQAESHDVLLCVQ
TGSNIADPNRFKFGGSGYFIKSAEEMRAVDGSDVWLEGCRNTLLVAERVDPAGMFEFHNL
MPRFPVPEGETEESWFRKETFKGLARRFPNGVPEGHVVQAEYELGVIIQMGFPSYFLVVA
DFIQWAKNQGIAVGPGRGSAAGSLVAYALGITDLDPIPHGLIFERFLNPERVSMPDVDID
FDERRRGEVIKYVTDKWGEDKVAQIATFGTIKAKAAIKDSARVLGYPYAVGDRITKAMPP
AVMGKDIPLGGIFDPKHPRYAEAGEIRGLYESDPDVRKVIDTAKGIEGLIRQTGVHAAGV
IMSAEPIIEHIPLMRRDSDGVIITQFDYPTCESLGLLKMDFLGLRNLTIIDDAVKNIQLN
HGKDLDLLGLELDDKAAYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVDSHTNYALRKNGLQEITPIHPELEEPLREILAPTHGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRERGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKMALYLSECRRMRIQVLPPDVNTSA
GPFTPVGKDIRFGLAAVRNVGANVVAAIMRCREEKGEYADFYDFLSKVDAVVCNKKTIES
LIKAGAFDALGHPRKGLLAVHAEAIDAYADVKRKEAVGQYDLFGAGFGDADTTSTTVMPV
IGDGEWDKRDKLAFEREMLGLYVSDHPLFGLEHVLGAAADCTIAALSEEGSVPDGAVVTL
AGILSGVQRRVTKQGRAWASATLEDLAGGVETLFFPNTYEVIGQYIAEDAIVVVKGRVDR
RDDTPRIMAMDMQLPDVTSNPGSKPVTLTIPVHRCTPPLVERLKETLVLHPGDTEVHVKL
LNGGKVTTLRLGPFRVAATTALMGDLKSVLGPANVS
NT seq 3531 nt   +upstreamnt  +downstreamnt
atggccgactcgttcgcgcatctgcacgtgcacacggagtactcgatgctcgacggtgcg
gcccgtctcaaggacctcttcgccgaggcgagccgactgggcatgccggcggtggcgatg
accgaccacggcaacatgcacggcgcgcacgacttctacaagcaggccatggccgccggg
atcaccccggtgctcggcatcgaggcgtacgtggcgccggagtcgcgcttccacaagcag
cgggtgaagtggggtcgtccggagcagaagagcgacgacgtctcgggtagtggtggctac
acccacaagacgatctgggcgcgcaaccggaccgggctgcacaacctcttcacgctcacc
tcgaaggcgtacaccgagggattcttcgtcaagtggccccggatggacaccgagctgatc
gccgcgcacgccgagggcctgatggccaccaccggctgcccgtcgggtgaggtgcagatc
cggctgcgtctcggccaggacgcccaggcactggaggcggcggcgaagtaccaggagatc
ttcggccgggagaactacttcctggagctgatggaccacggcctggacatcgagaagcgg
gtccgggacgggctgctggagatcggcaagaagctggccatccccccggtggtcaccaac
gactcgcactacacccacgaggcgcaggccgagtcgcacgacgtgctgctctgcgtccag
accggcagcaacatcgccgacccgaaccggttcaagttcggcggcagcggctacttcatc
aagtccgccgaggagatgcgcgcggtcgacggctcggacgtgtggctggagggctgccgt
aacaccctgctggtcgccgaacgggtcgacccggcggggatgttcgagttccacaacctg
atgccgcggttcccggtgccggagggggagaccgaggagtcctggttccgcaaggagacc
ttcaagggactggcgcgccgcttcccgaacggtgtcccggaggggcacgtcgtccaggcc
gagtacgagttgggcgtcatcatccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtgggcgaagaaccagggcatcgcggtcggtccgggccgtggctcggcg
gccggctcgctggtcgcgtacgcgctcggcatcaccgacctggacccgatcccgcacggc
ctgatcttcgagcggttcctgaaccccgagcgggtctccatgccggacgtcgacatcgac
ttcgacgagcgtcggcgcggtgaggtgatcaagtacgtcaccgacaagtggggtgaggac
aaggtcgcccagatcgccaccttcggcacgatcaaggcgaaggccgcgatcaaggactcg
gcccgggtgctcgggtacccgtacgcggtgggtgaccggatcaccaaggcgatgcccccg
gcggtgatgggcaaggacatcccgctcggcggcatcttcgacccgaagcacccccggtac
gccgaggccggcgagatccggggcctgtacgagtccgacccggacgtccgcaaggtgatc
gacaccgccaagggcatcgaggggctgatccggcagaccggtgtgcacgcggccggcgtg
atcatgtcggccgagccgatcatcgagcacatcccgctgatgcgccgggactccgacggg
gtgatcatcacccagttcgactacccgacgtgcgagtcgctcgggctgttgaagatggac
ttcctcggcctgcgcaacctgacgatcatcgacgacgcggtcaagaacatccagctcaac
cacggcaaggacctcgacctgctgggcctggagctggacgacaaggccgcctacgagctg
ctggcccggggcgacacgcttggcgtgttccagctcgacggcgggccgatgcggtcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtcctcgcgctctaccgg
cccggcccgatgggcgtggactcgcacaccaactacgcgctgcgcaagaacggcctccag
gagatcaccccgatccacccggagctggaggaaccgctccgggagatcctggcccccacc
cacggcctgatcgtctaccaggagcaggtgcagcgcgccgcgcagatcctcgccggctac
acgctcggccaggccgacctgctccggcgggcgatgggcaagaagaagaaggagatcctc
gacaaggagttcatcccgttccgggacggctgccgcgagcgcggctactccgacgaggcg
atccaggcggtgtgggacgtgctggtcccgttcgccggctacgccttcaacaaggcgcac
tccgcggcgtacgggctggtgtcgtactggacggcgtacctcaaggcgcactacccggcc
gagtacatggccgcgttgctgacctcggtcggcgacgacaaggacaagatggcgctctat
ctctccgagtgccgccggatgcggatccaggtcctgccgccggacgtgaacacctccgcc
gggccgttcaccccggtcgggaaggacatccggttcgggctcgcggcggtccgcaacgtc
ggcgcgaacgtggtcgccgcgatcatgcgttgccgggaggagaagggcgagtacgccgac
ttctacgacttcctgtcgaaggtcgacgcggtggtctgcaacaagaagaccatcgaatcc
ctgatcaaggccggggcgttcgacgcgctggggcacccccgcaagggcctgctcgccgtg
cacgccgaggcgatcgacgcgtacgccgacgtcaagcgcaaggaggcggtcggccagtac
gacctcttcggtgccggcttcggtgacgccgacaccaccagcacgaccgtgatgccggtg
atcggcgacggcgagtgggacaagcgggacaagctcgccttcgagcgcgagatgctcggc
ctctacgtctccgaccacccgctgttcgggctggaacacgtcctcggcgcggcggcggac
tgcaccatcgccgcactgtcggaggagggctcggtgcccgacggtgcggtggtcaccctc
gccggcatcctctccggggtgcagcgccgggtgaccaagcagggccgcgcctgggcgtcg
gccaccctggaggacctggccggcggggtggagacgctgttcttcccgaacacctacgag
gtgatcgggcagtacatcgccgaggacgcgatcgtggtggtcaagggccgggtggaccgc
cgggacgacacccccaggatcatggcgatggacatgcaactgcccgacgtcaccagcaat
ccgggcagcaagccggtcaccctgaccattccggtgcaccggtgcacgccgccgctggtg
gaacggctcaaggagaccctggtgctgcatcccggcgacaccgaggtgcacgtcaagctc
ctcaacggcggcaaggtcaccacgctgcggctcgggccgttccgggtggccgcgaccacc
gcgctgatgggtgacctgaagagcgtgctcggcccggcgaacgtgagctga

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