Mycolicibacterium smegmatis MC2 155: LJ00_00015
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Entry
LJ00_00015 CDS
T03433
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
msb
Mycolicibacterium smegmatis MC2 155
Pathway
msb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJ00_00015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msb03400
]
LJ00_00015
DNA repair and recombination proteins [BR:
msb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LJ00_00015
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_tran
SbcC_Walker_B
AAA_29
DUF2813
AAA
Motif
Other DBs
NCBI-ProteinID:
AIU05289
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Position
2624..3778
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AA seq
384 aa
AA seq
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MFARHLGLTDFRSWARVDLDLEPGRTVFVGPNGFGKTNLVEALWYSATLGSHRVATDAPL
IRAGAERAIVSTIVVNEGRELAVDLEITSGRANKARLNRSPVRSAREILGVLRAVLFSPE
DLSLVRGDPGDRRRYLDELATTRRPALAGVRADYDKVVRQRTALLKTAAGARYRGDRSVI
DTLEVWDGHLAAHGAALVASRVKLVEELQPEVEKAYQLLAPASRPAAIRYRSSVEAIEDA
PGPESVEFYEAALLDALARRRDAELERGVCLVGPHRDDLELRLGDQPAKGFASHGESWSM
ALALRLGAYELLCSDGVEPVLLLDDVFAELDTSRRRALVTVAGSAEQVLVTAAVGEDIPE
DWDARRVEIRMVEDDGGRVSMVAS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccggcatctcggactgaccgatttccggtcgtgggcacgggtcgatctcgat
ctcgagccggggcgcaccgtcttcgtgggccccaacggcttcgggaagacgaatcttgtt
gaggcgctgtggtattcggcaacgctcggatctcatcgggtggccaccgacgcgccgctg
atccgtgcgggtgccgaacgcgcgatcgtgtcgaccatcgtcgtcaacgagggtcgcgaa
ctcgcggtggatctcgagatcaccagtggccgggccaacaaggccaggttgaaccgttcc
ccggtacgcagtgcccgcgagatcctcggggtgctgcgcgcggtgttgttcagccccgag
gatctctcgctggtgcgcggggatccgggtgaccgcaggcgttacctcgacgaactcgcg
accacgcggcgtccggcgctcgcgggtgtgcgcgcggattacgacaaggtggtccgccag
cgcacggccttgctgaaaaccgctgcgggagcacgttatcggggcgaccgtagcgtgatc
gacacgctcgaggtgtgggacgggcacctcgccgcgcacggcgcggcgctcgtggcgtcg
cgcgtgaaactcgtcgaggaactgcagccagaggtcgagaaggcctaccagttgctcgca
ccggcctcgcgtcccgcggccatccggtaccgcagcagtgtcgaggccatagaggacgcg
ccgggccccgagagcgtggagttctacgaggccgcactgctcgacgcactggcgcgccgc
cgtgatgccgagctcgagcgtggtgtgtgcctcgtcgggccgcaccgcgacgacctggaa
ctgcgtctcggtgaccagcccgcgaaaggctttgccagccatggggaatcgtggtcgatg
gcgctggcactgcgactcggcgcctatgaactgttgtgctccgacggcgtcgagccggtg
ctgctcctcgacgacgtgttcgccgaactggacacctcgaggcggcgcgcgctggtcacc
gtggccggctcggccgagcaggttctggtgactgccgctgtgggcgaggacattccggag
gactgggacgcgcgtcgcgtcgagatccggatggtcgaggacgacggcggacgcgtttcg
atggtggcctcatga
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