Mycolicibacterium smegmatis MC2 155: LJ00_22220
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Entry
LJ00_22220 CDS
T03433
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
msb
Mycolicibacterium smegmatis MC2 155
Pathway
msb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LJ00_22220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msb03400
]
LJ00_22220
DNA repair and recombination proteins [BR:
msb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LJ00_22220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LJ00_22220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
DUF3724
Motif
Other DBs
NCBI-ProteinID:
AIU09564
LinkDB
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Position
complement(4571712..4572554)
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AA seq
280 aa
AA seq
DB search
MRLYRDRAVVLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDVQ
LHPGRNLDIVTQVQAIDAFAADIVSDYGRYTTACAMLETAERLAGEERAPMPDLHRLTVA
ALRAIADGRRARELVLDSYLLRAMAIAGWAPALTECARCAAPGPHRAFHVAAGGSVCVHC
RPSGSSTPPQAVLELMSALHDGDWEYAESSTPPHRSQASGLIAAHLQWHLERQLRTLPLV
ERGYRVDRTVAEQRAALVRQDMAHGNHTGQEDLPATASGA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtaccgtgaccgggcggtggtactgcgtcagcacaagcttggcgaggccgac
cggatcgtcaccctgctcacgcgcgaccacgggttggtccgcgcggtggccaagggtgtt
cgccgtacccgcagcaagttcggcgcgcggctcgaaccgtttgctcatatcgatgtgcag
ttgcacccgggccgcaatctcgacatcgtcacccaggtgcaggccatcgacgccttcgcc
gccgacatcgtcagtgactacgggcggtacaccaccgcgtgcgcgatgctcgagaccgcc
gagcggttggccggtgaggaacgcgcaccgatgcccgacctgcaccggttgaccgtggcg
gcgctgcgggcgatcgccgacggcaggcgggcccgtgaactggtgctcgactcctatctg
ctgcgggcgatggccatcgcgggctgggcgcccgcgctgaccgagtgcgcgcgctgcgcc
gcgccggggccgcaccgcgcgttccacgtcgccgcgggcggcagtgtgtgcgtgcactgc
aggcccagcgggtcgagcacgccgccgcaggccgtcctggaattgatgtcggcgctgcac
gacggcgactgggagtacgccgagtcctcgaccccgccacatcgcagccaggccagcggg
ctcatcgccgcgcacctgcagtggcatctggagcgtcaactgcgcacattgcctctggtc
gagcgcgggtaccgcgtcgacaggacggtcgccgagcaacgcgcagcgctggtcaggcag
gatatggcgcatggcaaccacacggggcaagaagacctacccgcaactgcctccggcgcc
tga
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