Mycolicibacterium smegmatis MC2 155: MSMEI_6111
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Entry
MSMEI_6111 CDS
T02191
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msg
Mycolicibacterium smegmatis MC2 155
Pathway
msg03030
DNA replication
msg03430
Mismatch repair
msg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSMEI_6111 (dnaQ)
03430 Mismatch repair
MSMEI_6111 (dnaQ)
03440 Homologous recombination
MSMEI_6111 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msg03032
]
MSMEI_6111 (dnaQ)
03400 DNA repair and recombination proteins [BR:
msg03400
]
MSMEI_6111 (dnaQ)
Enzymes [BR:
msg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSMEI_6111 (dnaQ)
DNA replication proteins [BR:
msg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSMEI_6111 (dnaQ)
DNA repair and recombination proteins [BR:
msg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSMEI_6111 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFP42542
UniProt:
I7GAG5
LinkDB
All DBs
Position
complement(6342018..6343031)
Genome browser
AA seq
337 aa
AA seq
DB search
MSRAPLSSTPQLWGRPADEPGSGWAVVDVETTGFRPGQARIVSVAALAVGDDGSVEHSMS
SLLNPGVDPGPTHVHGLTAEMLEGQPCFADVVDELIEVLRGRTLVAHNAGFDYSFLAAEA
ELVGAELPIDTAMCTVELARRLELGTENLRLETLAAHWGVTQMKPHDALDDALVLAQILK
PTLARARDRKVWLPLRQLTRKRWPNGHVTHDELRPLKVEASRLPCRYANPGPFVAGRPLV
QGMRVALSAEVVRTHEELLERVLHAGLAYSDMVDLQTSLVICNDPAPEQGKGYQAKELGV
PLVRDDEFMRLLDHVVGGADVETFVDTTADGDQYALF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgagcaccgctgtcgagcaccccgcagttgtgggggcggccggcggatgagccg
ggctcgggctgggcggtcgtcgatgtcgagaccacgggcttccggcccggtcaggcgcgc
atcgtgagcgtggccgcgctggcggtcggtgacgacggcagtgtcgagcacagcatgtcc
agtctgctcaaccctggtgtcgatccggggccgacgcacgtacatgggctcaccgccgag
atgctggagggccagccgtgcttcgccgacgtcgtcgacgagctgatcgaggtgctgcgc
ggacgcaccctggtcgcccacaacgcggggttcgactacagcttcctggccgccgaggcc
gaactggtgggcgccgaacttcccatcgacaccgcgatgtgcacggtcgagctggcacgc
aggctcgagctcggtaccgagaacctgcgtctggagacgctggccgcgcactggggcgtc
acgcagatgaagccgcatgacgcgctcgacgacgcgctggtgctcgcgcagatcctcaaa
cccacgctggcacgcgcccgcgatcgcaaggtgtggctgccgctgcgtcagctgacgcgc
aagcgctggcccaacgggcatgtgacacacgacgaattgcgtccgctcaaggtcgaggcg
tcgcgtctgccgtgccgttacgccaacccgggtccgttcgtcgcgggccgcccgctggtg
caggggatgcgggtggcgctgtcggccgaggtggtgcgcacacacgaggaactgctcgag
cgcgtcctgcacgccggccttgcctacagcgacatggtggatctgcagacgtcgctggtg
atctgcaacgacccggcgcccgagcagggcaagggctaccaggccaaggaactcggcgta
ccgctggtgcgtgacgacgagttcatgcgtctgctcgaccatgtggtcggtggtgccgac
gtcgagacgttcgtcgacaccaccgccgacggtgaccagtacgcgctgttctga
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