Mycolicibacterium smegmatis INHR2: LI98_13725
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Entry
LI98_13725 CDS
T03432
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
msh
Mycolicibacterium smegmatis INHR2
Brite
KEGG Orthology (KO) [BR:
msh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LI98_13725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msh03021
]
LI98_13725
Transcription machinery [BR:
msh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LI98_13725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Tub_N
Mo25
Motif
Other DBs
NCBI-ProteinID:
AIU21173
UniProt:
Q59552
LinkDB
All DBs
Position
complement(2826285..2827685)
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AA seq
466 aa
AA seq
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MAATKASPATEEPVKRTATKTPAKKAPAKRAAKSAAAKAGGKAPAKKAPAKRAAKGTAAK
PEDGVTDDLEVTDDLEAEPGEDLDVEDTDLELDDLDSDDDTAVEDEEEEADAATPAVATA
KAADDDIDEPSEKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLN
AEEEVELAKRIEAGLYATQKLAELAEKGEKLPVQQRRDMQWICRDGDRAKNHLLEANLRL
VVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQ
ARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPIS
LDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLT
DGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacaaaggcaagcccggcaaccgaagagccggtgaagcgcaccgctaccaag
acccccgccaagaaggccccagccaagcgggcagccaagagcgccgcggcgaaagccggc
ggcaaggcccccgccaagaaagccccggccaagcgggccgccaaaggcaccgctgccaag
cccgaggacggcgtcaccgacgaccttgaggtgaccgacgatctcgaggctgagcccggc
gaggatctcgacgtcgaagacaccgacctggaactcgacgacctcgactccgacgacgac
accgcagtcgaggacgaggaagaagaagctgatgccgcgacgcccgccgtcgcgaccgcg
aaggccgccgacgacgacatcgacgagccgtccgagaaggacaaggcgtccggcgacttc
gtgtgggacgaggaagagtccgaggccctgcgacaggcacgcaaagacgccgagctgacc
gcatcggccgactcggttcgcgcctacctcaagcagatcggcaaggtggccctgctcaac
gccgaagaagaggtggagctggccaagcgcatcgaggcgggtctctacgccacgcagaag
ctggccgaactcgccgagaagggcgagaagctgccagtgcagcagcgccgcgacatgcag
tggatctgccgcgacggcgaccgcgccaaaaaccatctgctggaggcgaacctgcgcctc
gtggtgtcgctggccaagcgctacaccggccgcggcatggcgttcctcgacctcatccag
gaaggcaacctgggcctgatccgtgcggtcgagaagttcgactacaccaagggctacaag
ttctcgacctacgccacgtggtggatccgccaggccatcacgcgcgccatggccgaccag
gcccgcaccatccgtatcccggtgcacatggtcgaggtgatcaacaagctcggccgtatc
cagcgtgagctgctgcaggacctgggccgcgagcccacgcccgaagagctcgccaaggag
atggacatcacgcccgagaaggtgctggagatccagcagtacgcgcgtgagcccatctcg
ctggaccagaccatcggcgacgagggtgacagccagctcggtgacttcatcgaggacagc
gaggcggtcgtggccgtggacgccgtgtcgttcacgctgctgcaggaccagctgcagtcc
gtgctggagacgctgtccgagcgtgaggccggcgtggttcgtctgcgcttcggcctgacc
gacggccagccgcgcacgctcgacgagatcggccaggtctacggcgtcacgcgtgagcgc
atccgccagatcgagtccaagaccatgtcgaagctgcgccacccgagccgttcgcaggtg
ctgcgcgactacctggactag
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