Mycobacterium shigaense: MSG_00862
Help
Entry
MSG_00862 CDS
T05717
Symbol
end
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSG_00862 (end)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mshg03400
]
MSG_00862 (end)
Enzymes [BR:
mshg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSG_00862 (end)
DNA repair and recombination proteins [BR:
mshg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSG_00862 (end)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAX91021
UniProt:
A0A1Z4EDG9
LinkDB
All DBs
Position
889422..890180
Genome browser
AA seq
252 aa
AA seq
DB search
MLIGSHVSPQDPLAAAEAEGADVVQIFLGNPQSWKAPKPREDAAVLKAAALPIYVHAPYL
INVASANNKVRIPSRKILQQTCDAAADIGAAAVIVHGGHVTDDNDLDEGFQRWRKALDQL
ESTVPVFLENTAGGDHAMARHFDTIARLWDVIGDSGIGFCLDTCHTWAAGEALVDAVDRI
KAITGRIDLVHCNDSKDEAGSGRDRHANLGTGQIDPDLLVAAVKAADAPVICETSDEGRK
DDIAFLRENANA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcggttcccacgtcagtccccaagacccgctggccgcagcggaggccgagggc
gctgacgttgtacagatattcctcggcaacccgcagagttggaaggcgcccaagccccgt
gaggacgccgccgtgctgaaggccgccgcgctgccgatctacgtgcatgcgccctacctg
atcaatgtcgcgtcggcgaacaacaaggtacggatcccgtcgcgcaagatcctgcagcaa
acctgcgatgcggccgccgacatcggcgccgcggcagtcatcgtgcacggtggccacgtc
accgacgacaacgacctcgacgagggtttccagcgctggcgcaaggcgctcgatcagctg
gaatccaccgtgccggtgtttttggaaaacacggcgggcggcgaccatgcgatggcccgc
cacttcgacaccatcgccaggttgtgggatgtcatcggcgacagtggaattgggttctgc
ctggacacctgccacacctgggctgccggcgaggcgctggtcgatgccgtcgatcggatc
aaggccatcaccggacggatcgatctggtgcactgcaacgactccaaggacgaggcgggc
tcgggccgggaccggcacgccaacctcggcaccggccagatcgatcccgacttgctggtc
gcggcggtcaaggccgcggacgcgccggtgatctgcgaaacgtccgacgagggccgtaaa
gacgacatcgcgttcctgcgcgagaacgccaacgcctaa
DBGET
integrated database retrieval system