Mycolicibacterium smegmatis MC2 155: MSMEG_1756
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Entry
MSMEG_1756 CDS
T00434
Name
(GenBank) endonuclease VIII and dna n-glycosylase with an ap lyase activity
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMEG_1756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msm03400
]
MSMEG_1756
Enzymes [BR:
msm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSMEG_1756
DNA repair and recombination proteins [BR:
msm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSMEG_1756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
zf-FPG_IleRS
H2TH
Motif
Other DBs
NCBI-ProteinID:
ABK74586
UniProt:
A0QT90
LinkDB
All DBs
Position
complement(1845058..1845816)
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AA seq
252 aa
AA seq
DB search
MPEGDTVFHTAAALRAALEGKTLTRCDVRVPRYATVDLSGAVVDEVLSRGKHLFIRAGSA
SIHSHLKMEGAWRIGHTKVAPHRIRIVLETADTRAIGIDLGILEVLDRGTDMDAVAYLGP
DLLGPDWEPRVAADNLAADPDRPLAQALLDQRVMAGVGNVYCNELCFVFGRLPTAPVGTL
KDPLRVVQRARDMLWLNRSRWNRTTTGDTRNGRQLWVYGRAGEPCRRCGTLIQTDRGGER
VTYWCPVCQTAS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggcgacaccgtgttccacaccgcggcagcattgcgcgccgccctggaaggc
aagacgctcacgcggtgcgatgtgcgggtgccgcgctacgccacggtggatctgagcggt
gcggtggtcgacgaggtgctcagccgcggcaaacatctgttcatccgtgccggatcggca
agcatccactcgcacctcaagatggagggcgcctggcggatcgggcacaccaaggtcgcg
ccccatcgcatccgcatcgtgctggagaccgccgacacccgcgcgatcggcatcgacctg
gggatcctggaggtcctcgaccgcggtaccgacatggacgccgtcgcctacctgggcccg
gacctgctggggccggactgggaaccgcgcgtcgctgcggacaatctcgcggccgacccg
gaccgtccgctggcgcaggccctgctcgaccagcgggtgatggcaggggtcggcaatgtc
tactgcaacgagttgtgtttcgtgttcggccgcctgcccaccgcaccggtcggcaccctg
aaggatccgctgcgcgtcgtgcaacgcgcgagggacatgttgtggctcaaccgctcccgc
tggaaccgcaccaccaccggtgacacccgcaacggccgccagctgtgggtgtacggccgc
gccggtgaaccgtgccgccgctgcggcacgttgatccagaccgatcgcggtggtgagcgc
gtcacctattggtgccccgtgtgccaaacggcgtcctga
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