Mycolicibacterium smegmatis MC2 155: MSMEG_5977
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Entry
MSMEG_5977 CDS
T00434
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
msm
Mycolicibacterium smegmatis MC2 155
Pathway
msm00521
Streptomycin biosynthesis
msm00523
Polyketide sugar unit biosynthesis
msm00541
O-Antigen nucleotide sugar biosynthesis
msm01100
Metabolic pathways
msm01110
Biosynthesis of secondary metabolites
msm01250
Biosynthesis of nucleotide sugars
Module
msm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
msm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MSMEG_5977 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSMEG_5977 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSMEG_5977 (rfbC)
Enzymes [BR:
msm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MSMEG_5977 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABK71839
UniProt:
A0R4W4
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All DBs
Position
6040647..6041201
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AA seq
184 aa
AA seq
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MRIEGADLADVLVLVPEPFRDERGLFTRTFDAHIFDDHLGRPGVSASFVQDSQSRSSQGV
VRGMHGRSERGEAKLVRCAHGAVHDVLVDIRPDSPTFGRQQAFLLDDKDFRHLYVPPGFL
HGFQALTAIADVCYRIDRPHDPSEDLAVAYNDPDLGIDWPLPVTMVSPRDAGAGSWSDLI
RHMS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtatcgaaggtgcagacctcgccgacgtgctggttctcgttccggagccgttccgc
gatgagcgcggactgttcacccggacgttcgacgcccacatcttcgacgaccacctcggc
cgacccggcgtctcggcgtcgttcgtccaggactcccagtcccgttcgtcgcagggcgtc
gtgcggggcatgcacggccgctccgaacgaggcgaagccaagctcgtgcgttgcgcccac
ggcgccgtgcacgacgtccttgtcgacattcgcccggactcccccaccttcggccgccaa
caggcatttctgcttgacgataaggattttcggcatctgtacgtgccccccggttttctt
catggttttcaggctctgacggccatcgccgatgtgtgctaccggatcgaccgcccccac
gatccatccgaggatctcgccgttgcctacaacgaccccgacctcgggatcgactggccg
ctaccggtcacgatggtctccccgcgagacgccggtgccggaagctggtccgacctgatc
aggcatatgtcctga
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