Mycolicibacterium smegmatis INHR1: LI99_07615
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Entry
LI99_07615 CDS
T03409
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msn
Mycolicibacterium smegmatis INHR1
Pathway
msn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LI99_07615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msn03021
]
LI99_07615
03400 DNA repair and recombination proteins [BR:
msn03400
]
LI99_07615
Enzymes [BR:
msn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LI99_07615
Transcription machinery [BR:
msn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LI99_07615
DNA repair and recombination proteins [BR:
msn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LI99_07615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AIU13384
UniProt:
A0A8B4QGQ9
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All DBs
Position
1613755..1614807
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEETVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSDDDEPVTMYLRKQGPGVVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIIDVETKNSISPRDALASAGGTLVELFGLARELNADSEHIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPATFDPSEVAGYDAATGTWTSDAGYDLDDNQDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgtcccaccctgtccgaagagaccgttgccgagaaccgctcgcgg
ttcgtcatcgagcctctggagcccggtttcggttacaccctgggcaactcgctgcggcgc
acgctgctgtcgtccattccgggcgcagcggtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtccccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcgtccgatgacgacgagccggtcaccatgtacctgcgcaagcag
ggccccggtgtcgtcaccgccggtgacatcgtcccgcccgcaggcgtgacggtgcacaac
ccggacatgcacatcgccaccctgaacgacaagggcaagctcgaggtcgagctcgtcgtc
gagcgcggccgtggctacgtgcccgccgtgcagaacaaggcctcgggtgccgagatcggc
cgcatcccggtcgattccatctactcgccggtgctcaaggtcacctacaaggtggaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcatcgacgtcgagaccaagaac
tcgatcagcccccgcgacgcgctcgcgtcggccggtggcacgctcgtcgaactgttcggt
ctggcacgcgaactcaacgccgattccgagcacatcgagatcggcccgtcgcctgccgag
gccgaccacatcgcgtcgttcgcactgcccatcgacgacctggacctcacggtgcggtcg
tacaactgcctcaagcgcgagggtgtgcacacggtgggcgagctcgtcgcccgcacggag
tccgacctgctggacatccgtaacttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagctgggtctctcgctgaaggacagcccggccacgttcgatccgtccgaggtc
gccggttacgacgcggccaccggcacctggaccagcgacgccggctacgacctggacgac
aaccaggactacgccgagaccgagcagctttaa
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